1YCA

DISTAL POCKET POLARITY IN LIGAND BINDING TO MYOGLOBIN: DEOXY AND CARBONMONOXY FORMS OF A THREONINE68 (E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED SPECTROSCOPY


X-RAY DIFFRACTION

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 124.2α = 90
b = 42.5β = 92.2
c = 92.1γ = 90
Symmetry
Space GroupP 1 21 1

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.98177670.189
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor40.55
p_staggered_tor21.61
p_scangle_it3.032
p_planar_tor2.643
p_scbond_it1.953
p_mcangle_it1.496
p_mcbond_it0.909
p_xhyhbond_nbd0.227
p_multtor_nbd0.224
p_singtor_nbd0.215
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor40.55
p_staggered_tor21.61
p_scangle_it3.032
p_planar_tor2.643
p_scbond_it1.953
p_mcangle_it1.496
p_mcbond_it0.909
p_xhyhbond_nbd0.227
p_multtor_nbd0.224
p_singtor_nbd0.215
p_chiral_restr0.144
p_planar_d0.079
p_angle_d0.054
p_bond_d0.02
p_plane_restr0.015
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2394
Nucleic Acid Atoms
Solvent Atoms107
Heterogen Atoms90

Software

Software
Software NamePurpose
PROLSQrefinement