1X6X

Structure 2: cryocolled crystal structure of the truncated pak pilin from Pseudomonas aeruginosa at 0.95A resolution


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION8.229360% Ammonium Sulfate, 0.1M Hepes, pH 8.2, VAPOR DIFFUSION, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.0740.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 37.577α = 90
b = 37.577β = 90
c = 148.555γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 41999-06-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSRS BEAMLINE PX9.60.87SRSPX9.6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
10.9536.515750.0740.07421.4117.850494504947.4
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
10.951.014.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1DZO0.9636.5150494504942537750.11380.11380.11290.13091RANDOM8.719
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.060.06-0.13
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.312
r_sphericity_free15.208
r_dihedral_angle_3_deg10.782
r_dihedral_angle_4_deg10.193
r_dihedral_angle_1_deg6.022
r_scangle_it4.637
r_sphericity_bonded4.287
r_scbond_it3.696
r_mcangle_it2.777
r_mcbond_it2.139
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.312
r_sphericity_free15.208
r_dihedral_angle_3_deg10.782
r_dihedral_angle_4_deg10.193
r_dihedral_angle_1_deg6.022
r_scangle_it4.637
r_sphericity_bonded4.287
r_scbond_it3.696
r_mcangle_it2.777
r_mcbond_it2.139
r_angle_refined_deg1.987
r_rigid_bond_restr1.36
r_angle_other_deg1.012
r_mcbond_other0.639
r_nbd_refined0.236
r_symmetry_hbond_refined0.219
r_symmetry_vdw_other0.21
r_nbd_other0.182
r_symmetry_vdw_refined0.18
r_xyhbond_nbd_refined0.147
r_chiral_restr0.136
r_nbtor_other0.084
r_bond_refined_d0.019
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms862
Nucleic Acid Atoms
Solvent Atoms232
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling