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The X-ray Structure of the cys84ala cys85ala double mutant of the [2Fe-2S] Ferredoxin subunit of Toluene-4-Monooxygenase from Pseudomonas Mendocina KR1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 293 10 MG/ML PROTEIN, 0.100M MES-ACETATE,
0.16M MAGNESIUM CHLORIDE, 24 PERCENT W/V MEPEG 5000, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.01 38.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 44.51 α = 90 b = 52.4 β = 90 c = 83.556 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm RH MIRROR 2004-02-27 M SINGLE WAVELENGTH 2 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV MULTILAYER 2004-03-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 32-ID 0.97924 APS 32-ID 2 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.48 50 99.9 0.055 32.5 13.6 16626
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.48 1.53 99.8 0.277 7.75 11.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.48 33.925 15761 838 99.66 0.156 0.15586 0.1548 0.157 0.1759 0.1753 RANDOM 14.035
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.288 0.692 -0.98
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 6.608 r_dihedral_angle_1_deg 6.121 r_scbond_it 4.24 r_scangle_other 2.973 r_mcangle_it 2.884 r_angle_refined_deg 2.427 r_mcbond_it 1.683 r_mcangle_other 1.399 r_angle_other_deg 0.995 r_scbond_other 0.975
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 6.608 r_dihedral_angle_1_deg 6.121 r_scbond_it 4.24 r_scangle_other 2.973 r_mcangle_it 2.884 r_angle_refined_deg 2.427 r_mcbond_it 1.683 r_mcangle_other 1.399 r_angle_other_deg 0.995 r_scbond_other 0.975 r_mcbond_other 0.357 r_symmetry_vdw_other 0.272 r_symmetry_hbond_refined 0.257 r_nbd_other 0.255 r_xyhbond_nbd_refined 0.236 r_nbd_refined 0.194 r_nbtor_refined 0.178 r_symmetry_vdw_refined 0.173 r_chiral_restr 0.118 r_nbtor_other 0.088 Metal-ion: refined atoms 0.074 r_gen_planes_other 0.022 r_bond_refined_d 0.02 r_gen_planes_refined 0.014 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 845 Nucleic Acid Atoms Solvent Atoms 133 Heterogen Atoms 18
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction HKL-2000 data scaling ARP/wARP model building