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Crystal structure analysis of sup35
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 277 HEPES, Ethylene Glycol, PEG 8000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Crystal Properties Matthews coefficient Solvent content 3.09 59.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.796 α = 90 b = 83.796 β = 90 c = 165.937 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-04-12 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 0.9787, 0.9724, 0.9791 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.35 20 99.5 0.047 11.2 6.9 28714 24790 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.35 2.41 99.5 0.375 2 6.9 2840
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.35 20 23902 1284 99.35 0.256 0.255 0.2581 0.284 0.2871 RANDOM 33.37
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.52 0.52 -1.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.717 r_scangle_it 1.924 r_angle_refined_deg 1.29 r_scbond_it 1.148 r_angle_other_deg 0.826 r_mcangle_it 0.781 r_mcbond_it 0.41 r_symmetry_vdw_other 0.238 r_nbd_other 0.22 r_nbd_refined 0.202
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.717 r_scangle_it 1.924 r_angle_refined_deg 1.29 r_scbond_it 1.148 r_angle_other_deg 0.826 r_mcangle_it 0.781 r_mcbond_it 0.41 r_symmetry_vdw_other 0.238 r_nbd_other 0.22 r_nbd_refined 0.202 r_symmetry_vdw_refined 0.19 r_symmetry_hbond_refined 0.184 r_xyhbond_nbd_refined 0.162 r_nbtor_other 0.085 r_chiral_restr 0.074 r_bond_refined_d 0.013 r_gen_planes_refined 0.004 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3222 Nucleic Acid Atoms Solvent Atoms 159 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SHARP phasing