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Crystal Structure of Androgen Receptor DNA-Binding Domain Bound to a Direct Repeat Response Element
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1HCQ ER Complex from PDB entry 1HCQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 291 PEG 400, magnesium chloride, Tris, DTT, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 137.89 α = 90 b = 137.89 β = 90 c = 85.71 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2003-07-09 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.0000, 1.2831 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 50 99.7 0.096 20.4 10.1 17313 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 3.1 3.21 99.1 0.62 2.5 1683
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT ER Complex from PDB entry 1HCQ 3.1 50 14839 725 85.4 0.246 0.2435 0.264 0.262 RANDOM 117.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 41.29 29.66 41.29 -82.58
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 20.5 c_mcangle_it 2.7 c_scangle_it 2.1 c_mcbond_it 1.46 c_angle_deg 1.3 c_scbond_it 1.24 c_improper_angle_d 1.1 c_bond_d 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1077 Nucleic Acid Atoms 732 Solvent Atoms Heterogen Atoms 4
Software Software Software Name Purpose CNS refinement HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing MOLREP phasing