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Crystal structure of Fel d 1- the major cat allergen
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.8 293 MPD, sodium acetate, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.97 37.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.29 α = 90 b = 51.539 β = 95.27 c = 67.725 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MARRESEARCH 2002-09-14 M SINGLE WAVELENGTH 2 1 x-ray 110 CCD ADSC QUANTUM 4 2002-11-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 1.13 MAX II I711 2 SYNCHROTRON ESRF BEAMLINE ID29 0.979 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.85 24.5 98.4 0.089 9.7 2.8 25173 18
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.85 1.95 99.7 0.46 2.5 2.7 3511
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.85 24.04 24247 1298 99.98 0.2027 0.20275 0.20087 0.23731 0.2441 RANDOM 16.598
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.34 0.01 -0.96 -1.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.991 r_scangle_it 3.233 r_scbond_it 1.897 r_angle_refined_deg 1.268 r_mcangle_it 1.236 r_angle_other_deg 0.8 r_mcbond_it 0.65 r_nbd_other 0.222 r_symmetry_hbond_refined 0.217 r_nbd_refined 0.206
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 4.991 r_scangle_it 3.233 r_scbond_it 1.897 r_angle_refined_deg 1.268 r_mcangle_it 1.236 r_angle_other_deg 0.8 r_mcbond_it 0.65 r_nbd_other 0.222 r_symmetry_hbond_refined 0.217 r_nbd_refined 0.206 r_xyhbond_nbd_refined 0.185 r_symmetry_vdw_other 0.166 r_symmetry_vdw_refined 0.139 r_nbtor_other 0.084 r_chiral_restr 0.071 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2202 Nucleic Acid Atoms Solvent Atoms 265 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling SOLVE phasing RESOLVE phasing