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SOLUTION STRUCTURE OF THE THIRD RNA RECOGNITION MOTIF (RRM) OF U2AF65 IN COMPLEX WITH AN N-TERMINAL SF1 PEPTIDE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-SEPARATED_NOESY 1MM 15N,13C U2AF65-RRM3 + 1MM UNLABELED SF1_10-25, 30MM PHOSPHATE BUFFER, 20MM NACL, 3MM DTT D2O 50mM SALT 6.4 AMBIENT 295 2 3D_ 15N-SEPARATED_NOESY 1MM 15N,13C U2AF65-RRM3 + 1MM UNLABELED SF1_10-25, 30MM PHOSPHATE BUFFER, 20MM NACL, 3MM DTT D2O 50mM SALT 6.4 AMBIENT 295 3 3D_13C/15N-EDITED/FILTERED_NOESY 1MM 15N,13C U2AF65-RRM3 + 1MM UNLABELED SF1_10-25, 30MM PHOSPHATE BUFFER, 20MM NACL, 3MM DTT D2O 50mM SALT 6.4 AMBIENT 295
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 600 2 Bruker DRX 500 3 Bruker DRX 800
NMR Refinement Method Details Software RESTRAINED MOLECULAR DYNAMICS USING CNS AND ARIA FOR AMBIGUOUS DISTANCE RESTRAINTS REFINEMENT OF PROTEIN STRUCTURES IN WATER SOLVENT, ACCORDING TO LINGE ET AL. (PROTEINS 50:496 -506, 2003) CNS
NMR Ensemble Information Conformer Selection Criteria STRUCTURES WITH THE LEAST RESTRAINT VIOLATIONS, STRUCTURES WITH THE LOWEST ENERGY Conformers Calculated Total Number 100 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.1 BRUNGER 2 refinement ARIA 1.2 NILGES