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CRYSTAL STRUCTURE OF BOVINE OBP COMPLEXED WITH AMINOANTHRACENE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1OBP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.7 dialysys against 38% ethanol in 25 mM sodium Citrate at 4 degrees, pH 5.7
Crystal Properties Matthews coefficient Solvent content 2.04 39.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.589 α = 90 b = 65.091 β = 98.29 c = 42.249 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE MARRESEARCH 2000-09-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 17 92 5.2 8.5 2.8 26203 21.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.89 85.4 0.44 2.1 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MR THROUGHOUT 1OBP 1.8 9.95 25449 1231 92.3 0.202 0.202 0.2028 0.223 0.2236 RANDOM 34.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.52 -1.19 -5.32 7.83
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 25.8 c_scangle_it 3.19 c_mcangle_it 2.46 c_scbond_it 2.05 c_mcbond_it 1.54 c_angle_deg 1.5 c_improper_angle_d 0.84 c_bond_d 0.013 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 25.8 c_scangle_it 3.19 c_mcangle_it 2.46 c_scbond_it 2.05 c_mcbond_it 1.54 c_angle_deg 1.5 c_improper_angle_d 0.84 c_bond_d 0.013 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2581 Nucleic Acid Atoms Solvent Atoms 120 Heterogen Atoms 39
Software Software Software Name Purpose CNS refinement DENZO data reduction CCP4 data scaling CNS phasing