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Crystal structure of lima bean trypsin inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 0.6 M K,NA-TARTRATE, 0.1 M HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 6.02 79.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 109.157 α = 90 b = 109.157 β = 90 c = 109.157 γ = 90
Symmetry Space Group I 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2002-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.04 77.19 98.5 0.0567 12.43 6.33 13776
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.04 2.15 96.1 0.2975 3.58 3.08
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER FREE R-VALUE 2.04 10 13638 676 98.7 0.2529 0.2534 0.2202 0.2753 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 500.83
RMS Deviations Key Refinement Restraint Deviation s_similar_adp_cmpnt 0.097 s_non_zero_chiral_vol 0.063 s_zero_chiral_vol 0.047 s_from_restr_planes 0.0315 s_angle_d 0.03 s_anti_bump_dis_restr 0.01 s_bond_d 0.009 s_similar_dist s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 424 Nucleic Acid Atoms Solvent Atoms 78 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELXD phasing SHELXE phasing SHELXL-97 refinement