☰ Navigation Tabs
IDIOTOPE-ANTI-IDIOTOPE FAB-FAB COMPLEX; D1.3-E225
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FDL FAB D1.3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.9 12% PEG 800,
75 MILLIMOLAR SODIUM ACETATE PH 4.85
10MGM/ML PROTEIN CONCENTRATION , pH 4.9
Crystal Properties Matthews coefficient Solvent content 2.8 55.84
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.11 α = 90 b = 77.65 β = 111.8 c = 96.75 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 AREA DETECTOR 1987-11-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 13.7 97 0.076 2.84 33526
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FAB D1.3 2.5 7 2.5 26929 0.179 0.1656
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 22.3 p_scangle_it 2.62 p_mcangle_it 2.1 p_planar_tor 2.1 p_scbond_it 1.6 p_mcbond_it 1.12 p_chiral_restr 0.115 p_planar_d 0.044 p_angle_d 0.042 p_bond_d 0.016
RMS Deviations Key Refinement Restraint Deviation p_staggered_tor 22.3 p_scangle_it 2.62 p_mcangle_it 2.1 p_planar_tor 2.1 p_scbond_it 1.6 p_mcbond_it 1.12 p_chiral_restr 0.115 p_planar_d 0.044 p_angle_d 0.042 p_bond_d 0.016 p_plane_restr 0.01 p_angle_deg p_hb_or_metal_coord p_singtor_nbd p_multtor_nbd p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_transverse_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6605 Nucleic Acid Atoms Solvent Atoms 128 Heterogen Atoms
Software Software Software Name Purpose ROTAVATA data reduction Agrovata data reduction AMoRE phasing PROFFT refinement CCP4 data scaling ROTAVATA data scaling