1AR8

P1/MAHONEY POLIOVIRUS, MUTANT P1095S


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 2PLVPDB ENTRY 2PLV

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1microdiaylsis7.5VIRUS WAS CRYSTALLIZED BY MICRODIALYSIS AGAINST 10MM PIPES, 0-70 MM NACL, PH 7.5, 2% PEG 400, microdiaylsis
Crystal Properties
Matthews coefficientSolvent content
2.5930

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 323.04α = 90
b = 358.22β = 90
c = 380.14γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray258FILMSUPPER LONG MIRRORS1995-12-01M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEELLIOTT GX-13

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.940340.1512.5333627

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTPDB ENTRY 2PLV2.911333627340.27
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
o_dihedral_angle_d26.2
o_angle_deg2.46
o_improper_angle_d1.32
o_bond_d0.012
o_bond_d_na
o_bond_d_prot
o_angle_d
o_angle_d_na
o_angle_d_prot
o_angle_deg_na
RMS Deviations
KeyRefinement Restraint Deviation
o_dihedral_angle_d26.2
o_angle_deg2.46
o_improper_angle_d1.32
o_bond_d0.012
o_bond_d_na
o_bond_d_prot
o_angle_d
o_angle_d_na
o_angle_d_prot
o_angle_deg_na
o_angle_deg_prot
o_dihedral_angle_d_na
o_dihedral_angle_d_prot
o_improper_angle_d_na
o_improper_angle_d_prot
o_mcbond_it
o_mcangle_it
o_scbond_it
o_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6645
Nucleic Acid Atoms
Solvent Atoms503
Heterogen Atoms36

Software

Software
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
CIRCLESdata reduction
X-PLORphasing