9SDA | pdb_00009sda

Cryo-EM structure of the 70S ribosome from Francisella tularensis bound to a hibernation-promoting factor


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Chains: A---
Chains: B---
Large ribosomal subunit protein uL2
Large ribosomal subunit protein uL3
Large ribosomal subunit protein uL4
Large ribosomal subunit protein uL5
Large ribosomal subunit protein uL6
Large ribosomal subunit protein bL9
Large ribosomal subunit protein uL13
Large ribosomal subunit protein uL14
Large ribosomal subunit protein uL15
Large ribosomal subunit protein uL16
Large ribosomal subunit protein bL17
Large ribosomal subunit protein uL18
Large ribosomal subunit protein bL19
Large ribosomal subunit protein bL20
Large ribosomal subunit protein bL21
Large ribosomal subunit protein uL22
Large ribosomal subunit protein uL23
Large ribosomal subunit protein uL24
Large ribosomal subunit protein bL25
Large ribosomal subunit protein bL27
Large ribosomal subunit protein bL28
Large ribosomal subunit protein uL29
Large ribosomal subunit protein uL30
Large ribosomal subunit protein bL31
AA [auth 0]Large ribosomal subunit protein bL32
BA [auth 1]Large ribosomal subunit protein bL33
CA [auth 2]Large ribosomal subunit protein bL34
DA [auth 3]Large ribosomal subunit protein bL35
EA [auth 4]Large ribosomal subunit protein bL36
FA [auth a]Chains: a---
GA [auth b]Small ribosomal subunit protein uS2
HA [auth c]Small ribosomal subunit protein uS3
IA [auth d]Small ribosomal subunit protein uS4
JA [auth e]Small ribosomal subunit protein uS5
KA [auth f]Small ribosomal subunit protein bS6
LA [auth g]Small ribosomal subunit protein uS7
MA [auth h]Small ribosomal subunit protein uS8
NA [auth i]Small ribosomal subunit protein uS9
OA [auth j]Small ribosomal subunit protein uS10
PA [auth k]Small ribosomal subunit protein uS11
QA [auth l]Small ribosomal subunit protein uS12
RA [auth m]Small ribosomal subunit protein uS13
SA [auth n]Small ribosomal subunit protein uS14
TA [auth o]Small ribosomal subunit protein uS15
UA [auth p]Small ribosomal subunit protein bS16
VA [auth q]Small ribosomal subunit protein uS17
WA [auth r]Small ribosomal subunit protein bS18
XA [auth s]Small ribosomal subunit protein uS19
YA [auth t]Small ribosomal subunit protein bS20
ZA [auth u]Small ribosomal subunit protein bS21B
AB [auth 9]Ribosome hibernation promoting factor

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR013005Large ribosomal subunit protein uL4-likeFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
IPR000244Large ribosomal subunit protein bL9Family
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005822Large ribosomal subunit protein uL13Family
IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IPR000218Large ribosomal subunit protein uL14Family
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR030878Large ribosomal subunit protein uL15Family
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
IPR000456Large ribosomal subunit protein bL17Family
IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
IPR057268Large ribosomal subunit protein uL18Family
IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
IPR001857Large ribosomal subunit protein bL19Family
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
IPR005813Large ribosomal subunit protein bL20Family
IPR028909Large ribosomal subunit protein bL21-likeFamily
IPR001787Large ribosomal subunit protein bL21Family
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
IPR001063Large ribosomal subunit protein uL22Family
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IPR013025Large ribosomal subunit protein uL23-likeFamily
IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
IPR003256Large ribosomal subunit protein uL24Family
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR005824KOWDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
IPR001021Ribosomal protein bL25, long-formFamily
IPR020055Ribosomal protein bL25, short-formFamily
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
IPR001684Large ribosomal subunit protein bL27Family
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
IPR026569Large ribosomal subunit protein bL28Family
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
IPR050063Universal ribosomal protein uL29Family
IPR001854Large ribosomal subunit protein uL29Family
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
IPR027491Large ribosomal subunit protein bL31 type AFamily
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth 0]IPR002677Large ribosomal subunit protein bL32Family
AA [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth 0]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
BA [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth 1]IPR001705Large ribosomal subunit protein bL33Family
BA [auth 1]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth 2]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth 2]IPR000271Large ribosomal subunit protein bL34Family
DA [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth 3]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth 3]IPR001706Large ribosomal subunit protein bL35Family
DA [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth 4]IPR000473Large ribosomal subunit protein bL36Family
EA [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
GA [auth b]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
GA [auth b]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
GA [auth b]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
GA [auth b]IPR001865Small ribosomal subunit protein uS2Family
HA [auth c]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
HA [auth c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
HA [auth c]IPR057258Small ribosomal subunit protein uS3Family
HA [auth c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
HA [auth c]IPR004087K Homology domainDomain
HA [auth c]IPR004044K Homology domain, type 2Domain
HA [auth c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
HA [auth c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
HA [auth c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
IA [auth d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IA [auth d]IPR002942RNA-binding S4 domainDomain
IA [auth d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IA [auth d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IA [auth d]IPR022801Small ribosomal subunit protein uS4Family
IA [auth d]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
JA [auth e]IPR000851Small ribosomal subunit protein uS5Family
JA [auth e]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
JA [auth e]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
JA [auth e]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
JA [auth e]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
JA [auth e]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
JA [auth e]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
KA [auth f]IPR000529Small ribosomal subunit protein bS6Family
KA [auth f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
KA [auth f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
KA [auth f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
LA [auth g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
LA [auth g]IPR000235Small ribosomal subunit protein uS7Family
LA [auth g]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
LA [auth g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
LA [auth g]IPR023798Small ribosomal subunit protein uS7 domainDomain
MA [auth h]IPR000630Small ribosomal subunit protein uS8Family
MA [auth h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
MA [auth h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
NA [auth i]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NA [auth i]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
NA [auth i]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NA [auth i]IPR000754Small ribosomal subunit protein uS9Family
NA [auth i]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OA [auth j]IPR001848Small ribosomal subunit protein uS10Family
OA [auth j]IPR027486Small ribosomal subunit protein uS10 domainDomain
OA [auth j]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
PA [auth k]IPR001971Small ribosomal subunit protein uS11Family
PA [auth k]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
PA [auth k]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
PA [auth k]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
QA [auth l]IPR006032Small ribosomal subunit protein uS12Family
QA [auth l]IPR005679Ribosomal protein uS12, bacteriaFamily
QA [auth l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RA [auth m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
RA [auth m]IPR001892Small ribosomal subunit protein uS13Family
RA [auth m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
RA [auth m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
RA [auth m]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
SA [auth n]IPR001209Small ribosomal subunit protein uS14Family
SA [auth n]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
SA [auth n]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
TA [auth o]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
TA [auth o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TA [auth o]IPR000589Small ribosomal subunit protein uS15Family
UA [auth p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
UA [auth p]IPR000307Small ribosomal subunit protein bS16Family
VA [auth q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
VA [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth q]IPR000266Small ribosomal subunit protein uS17Family
WA [auth r]IPR001648Small ribosomal subunit protein bS18Family
WA [auth r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
WA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
XA [auth s]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
XA [auth s]IPR002222Small ribosomal subunit protein uS19Family
XA [auth s]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
XA [auth s]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
YA [auth t]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
YA [auth t]IPR002583Small ribosomal subunit protein bS20Family
ZA [auth u]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
ZA [auth u]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
ZA [auth u]IPR001911Small ribosomal subunit protein bS21Family
AB [auth 9]IPR003489Ribosome hibernation promoting factor/RaiAFamily
AB [auth 9]IPR036567Ribosome hibernation promotion factor-likeHomologous Superfamily
AB [auth 9]IPR050574HPF/YfiA ribosome-associatedFamily