8XLP

Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth a],
R [auth A]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
C [auth c],
T [auth C]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family
D [auth d],
U [auth D]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
E [auth e],
V [auth E]		PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
G [auth h],
X [auth H]		PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
H [auth i],
Y [auth I]		PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family
AA [auth L],
J [auth l]		PF02419PsbL protein (PsbL)PsbL protein- Family
CA [auth T],
L [auth t]		PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
EA [auth X],
N [auth x]		PF06596Photosystem II reaction centre X protein (PsbX) (PsbX)Photosystem II reaction centre X protein (PsbX)- Family
GA [auth Z],
P [auth z]		PF01737YCF9 (Ycf9)YCF9- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth a],
R [auth A]		Photosystem II protein D1
B [auth b],
S [auth B]		Photosystem II CP47 reaction center protein
C [auth c],
T [auth C]		Photosystem II CP43 reaction center protein
D [auth d],
U [auth D]		Photosystem II D2 protein
E [auth e],
V [auth E]		Cytochrome b559 subunit alpha
F [auth f],
W [auth F]		Cytochrome b559 subunit beta
G [auth h],
X [auth H]		Photosystem II reaction center protein H
H [auth i],
Y [auth I]		Photosystem II reaction center protein I-
I [auth k],
Z [auth K]		Photosystem II reaction center protein K-
AA [auth L],
J [auth l]		Photosystem II reaction center protein L-
BA [auth M],
K [auth m]		Photosystem II protein M---
CA [auth T],
L [auth t]		Photosystem II reaction center protein T-
DA [auth W],
M [auth w]		Photosystem II protein W---
EA [auth X],
N [auth x]		Photosystem II reaction center X protein-
FA [auth Y],
O [auth y]		Photosystem II reaction center protein Psb30-
GA [auth Z],
P [auth z]		Photosystem II reaction center protein Z-
MA [auth G],
Q [auth g]		NCP---
HA [auth 2],
OA [auth O]		CAC2---
IA [auth 3],
PA [auth P]		CAC3---
JA [auth 4],
QA [auth Q]		CAC4---
KA [auth 5],
RA [auth R]		CAC5---
LA [auth 6],
SA [auth S]		CAC6---
NA [auth 1],
TA [auth N]		CAC1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth a],
R [auth A]		IPR005867Photosystem II protein D1Family
A [auth a],
R [auth A]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A [auth a],
R [auth A]		IPR000484Photosynthetic reaction centre, L/MFamily
B [auth b],
S [auth B]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
B [auth b],
S [auth B]		IPR000932Photosystem antenna protein-likeFamily
B [auth b],
S [auth B]		IPR017486Photosystem II CP47 reaction centre proteinFamily
C [auth c],
T [auth C]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
C [auth c],
T [auth C]		IPR000932Photosystem antenna protein-likeFamily
C [auth c],
T [auth C]		IPR005869Photosystem II CP43 reaction centre proteinFamily
C [auth c],
T [auth C]		IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
D [auth d],
U [auth D]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
D [auth d],
U [auth D]		IPR000484Photosynthetic reaction centre, L/MFamily
D [auth d],
U [auth D]		IPR005868Photosystem II D2 proteinFamily
E [auth e],
V [auth E]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
E [auth e],
V [auth E]		IPR006217Photosystem II cytochrome b559, alpha subunitFamily
E [auth e],
V [auth E]		IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
E [auth e],
V [auth E]		IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
E [auth e],
V [auth E]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
F [auth f],
W [auth F]		IPR006241Photosystem II cytochrome b559, beta subunitFamily
F [auth f],
W [auth F]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
F [auth f],
W [auth F]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
G [auth h],
X [auth H]		IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
G [auth h],
X [auth H]		IPR001056Photosystem II reaction centre protein HFamily
H [auth i],
Y [auth I]		IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
H [auth i],
Y [auth I]		IPR003686Photosystem II PsbIFamily
I [auth k],
Z [auth K]		IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
I [auth k],
Z [auth K]		IPR003687Photosystem II PsbKFamily
AA [auth L],
J [auth l]		IPR003372Photosystem II PsbLFamily
AA [auth L],
J [auth l]		IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
CA [auth T],
L [auth t]		IPR001743Photosystem II PsbTFamily
CA [auth T],
L [auth t]		IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
EA [auth X],
N [auth x]		IPR009518Photosystem II PsbXFamily
EA [auth X],
N [auth x]		IPR023431Photosystem II PsbX, type 1 subfamilyFamily
FA [auth Y],
O [auth y]		IPR010284Photosystem II reaction center protein Ycf12Family
GA [auth Z],
P [auth z]		IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
GA [auth Z],
P [auth z]		IPR002644Photosystem II PsbZ, reaction centreFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM