Annotations: 8VVK

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
C, F [auth L]	Light Chain	IGLV3	Lambda	gp38	SAbDab (2024-11-15)
D, E [auth H]	Heavy Chain	IGHV4	-	gp38	SAbDab (2024-11-15)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF07948	Nairovirus GP38 (Nairovirus_GP38)	Nairovirus GP38	This entry represents the GP38 secreted glycoprotein from nairoviruses, including CCHFV and Dugbe virus. It is encoded in the glycoprotein precursor complex (GPC) from the M segment of nairovirus genome. It has a novel fold composed of a 3-helix bun ...	This entry represents the GP38 secreted glycoprotein from nairoviruses, including CCHFV and Dugbe virus. It is encoded in the glycoprotein precursor complex (GPC) from the M segment of nairovirus genome. It has a novel fold composed of a 3-helix bundle and a beta-sandwich [1,2]. Although its function is unknown, it is immunogenic in humans and, therefore, an interesting vaccine target [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F [auth L]	ADI-46143 Fab Light Chain	-	-	-
D, E [auth H]	ADI-46143 Fab Heavy Chain	-	-	-
A, B	GP38	-	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host process modulation by virus of host process virus-mediated perturbation of host defense response viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host defense response symbiont-mediated perturbation of host process modulation by virus of host process virus-mediated perturbation of host defense response modulation of process of another organism modulation by virus of host cellular process import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization vesicle-mediated transport localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell transport of virus	cellular anatomical structure membrane virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system cellular anatomical structure membrane virion component virion membrane host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane viral membrane viral envelope host cell Golgi membrane host cell Golgi apparatus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR048791	Glycoprotein Gc, C-terminal, bunyavirales	Domain
A, B	IPR002532	Hantavirus glycoprotein Gc, N-terminal domain	Domain
A, B	IPR048801	Structural glycoprotein Gn, nairovirus	Domain
A, B	IPR048529	GP38, nairovirus	Domain
A, B	IPR049491	Mucin-like domain, nairovirus	Domain
A, B	IPR048796	Non-Structural protein M domain, nairovirus	Domain
A, B	IPR012487	Nairovirus M polyprotein-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.