8V3Z

CryoEM Structure of Diffocin - postcontracted - Collar - transitional state

External Resource: Annotation

Protein Family Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth b], CA [auth p], H [auth n], JA [auth j], O [auth o], A [auth b], CA [auth p], H [auth n], JA [auth j], O [auth o], V [auth L]	PF20765	Domain of unknown function (DUF6838) (DUF6838)	Domain of unknown function (DUF6838)	This family may be a phage tail protein.	Domain
B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], FA [auth O], I [auth Y], J [auth k], K [auth M], KA [auth h], LA [auth i], MA [auth d], P [auth Z], Q [auth l], R [auth N], W [auth J], X [auth K], Y [auth F]	PF04984	Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)	Phage tail sheath protein subtilisin-like domain	This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	Domain
B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], FA [auth O], I [auth Y], J [auth k], K [auth M], KA [auth h], LA [auth i], MA [auth d], P [auth Z], Q [auth l], R [auth N], W [auth J], X [auth K], Y [auth F]	PF20765	Domain of unknown function (DUF6838) (DUF6838)	Domain of unknown function (DUF6838)	This family may be a phage tail protein.	Domain
AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], GA [auth U], HA [auth X], IA [auth R], L [auth S], M [auth V], N [auth P], NA [auth f], OA [auth g], PA [auth e], S [auth T], T [auth W], U [auth Q], Z [auth H]	PF17482	Phage tail sheath C-terminal domain (Phage_sheath_1C)	Phage tail sheath C-terminal domain	This entry represents the C-terminal domain in a variety of phage tail sheath proteins [4].	Domain
AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], GA [auth U], HA [auth X], IA [auth R], L [auth S], M [auth V], N [auth P], NA [auth f], OA [auth g], PA [auth e], S [auth T], T [auth W], U [auth Q], Z [auth H]	PF04984	Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)	Phage tail sheath protein subtilisin-like domain	This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	Domain
AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], GA [auth U], HA [auth X], IA [auth R], L [auth S], M [auth V], N [auth P], NA [auth f], OA [auth g], PA [auth e], S [auth T], T [auth W], U [auth Q], Z [auth H]	PF20765	Domain of unknown function (DUF6838) (DUF6838)	Domain of unknown function (DUF6838)	This family may be a phage tail protein.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth b], CA [auth p], H [auth n], JA [auth j], O [auth o], A [auth b], CA [auth p], H [auth n], JA [auth j], O [auth o], V [auth L]	IPR049254	Protein of unknown function DUF6838	Family
B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], FA [auth O], I [auth Y], J [auth k], K [auth M], KA [auth h], LA [auth i], MA [auth d], P [auth Z], Q [auth l], R [auth N], W [auth J], X [auth K], Y [auth F]	IPR018989	Phage tail tube protein	Family
B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], B [auth E], C [auth a], D [auth A], DA [auth c], EA [auth m], FA [auth O], I [auth Y], J [auth k], K [auth M], KA [auth h], LA [auth i], MA [auth d], P [auth Z], Q [auth l], R [auth N], W [auth J], X [auth K], Y [auth F]	IPR038628	XkdM-like superfamily	Homologous Superfamily
AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], GA [auth U], HA [auth X], IA [auth R], L [auth S], M [auth V], N [auth P], NA [auth f], OA [auth g], PA [auth e], S [auth T], T [auth W], U [auth Q], Z [auth H]	IPR020287	Tail sheath protein, C-terminal domain	Domain
AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], AA [auth I], BA [auth G], E [auth C], F [auth D], G [auth B], GA [auth U], HA [auth X], IA [auth R], L [auth S], M [auth V], N [auth P], NA [auth f], OA [auth g], PA [auth e], S [auth T], T [auth W], U [auth Q], Z [auth H]	IPR035089	Tail sheath protein, subtilisin-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.