8PJ2

Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 1]SCOP2B SuperfamilyRNA-binding domain, RBD 8073934 3000110 SCOP2B (2022-06-29)
C [auth 3]SCOP2B SuperfamilyARM repeat-like 8002866 3000116 SCOP2B (2022-06-29)
C [auth 3]SCOP2B SuperfamilyWinged helix DNA-binding domain 8002864 3000034 SCOP2B (2022-06-29)
D [auth 4]SCOP2B SuperfamilyEIF3 subunit F C-terminal domain-like 8053241 3002167 SCOP2B (2022-06-29)
D [auth 4]SCOP2B SuperfamilyJAB1/MPN domain-like 8053242 3001105 SCOP2B (2022-06-29)
H [auth 8]SCOP2B SuperfamilyJAB1/MPN domain-like 8053284 3001105 SCOP2B (2022-06-29)
K [auth B]SCOP2B SuperfamilyNucleic acid-binding proteins 8052717 3000135 SCOP2B (2022-06-29)
K [auth B]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052715 3002138 SCOP2B (2022-06-29)
L [auth C]SCOP2B SuperfamilyNucleic acid-binding proteins 8052756 3000135 SCOP2B (2022-06-29)
L [auth C]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052755 3001473 SCOP2B (2022-06-29)
L [auth C]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052757 3000334 SCOP2B (2022-06-29)
O [auth F]SCOP2B SuperfamilyRibosomal protein S30e-like 8053453 3002190 SCOP2B (2022-06-29)
R [auth I]SCOP2B SuperfamilyHomeodomain-like 8052958 3000001 SCOP2B (2022-06-29)
R [auth I]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052959 3001284 SCOP2B (2022-06-29)
S [auth J]SCOP2B SuperfamilyRibosomal protein S8 8095469 3000709 SCOP2B (2022-06-29)
T [auth K]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053139 3000068 SCOP2B (2022-06-29)
W [auth N]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8052791 3001397 SCOP2B (2022-06-29)
X [auth O]SCOP2B SuperfamilyRibosomal S3Ae-like 8053212 3002166 SCOP2B (2022-06-29)
Y [auth P]SCOP2B SuperfamilyTranslational machinery components 8098844 3000571 SCOP2B (2022-06-29)
Z [auth Q]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053143 3000068 SCOP2B (2022-06-29)
AA [auth R]SCOP2B Superfamily50S Ribosomal protein L14-like 8053077 3000433 SCOP2B (2022-06-29)
BA [auth S]SCOP2B SuperfamilyGS N-terminal domain-like 8053171 3000408 SCOP2B (2022-06-29)
DA [auth V]SCOP2B SuperfamilyRibosomal protein S7 8066003 3000799 SCOP2B (2022-06-29)
EA [auth Y]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082685 3000100 SCOP2B (2022-06-29)
FA [auth Z]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8043545 3001043 SCOP2B (2022-06-29)
GA [auth a]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055714 3000034 SCOP2B (2022-06-29)
JA [auth d]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089318 3000034 SCOP2B (2022-06-29)
KA [auth e]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090992 3000034 SCOP2B (2022-06-29)
LA [auth f]SCOP2B SuperfamilyS13-like H2TH domain 8101555 3000053 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyRibosomal protein S10 8098806 3001336 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052572 3000068 SCOP2B (2022-06-29)
PA [auth m]SCOP2B SuperfamilyL30e-like 8063978 3001739 SCOP2B (2022-06-29)
QA [auth n]SCOP2B SuperfamilyNucleic acid-binding proteins 8063426 3000135 SCOP2B (2022-06-29)
RA [auth o]SCOP2B SuperfamilyRNA-binding domain, RBD 8039192 3000110 SCOP2B (2022-06-29)
TA [auth r]SCOP2B SuperfamilyNucleic acid-binding proteins 8042151 3000135 SCOP2B (2022-06-29)
TA [auth r]SCOP2B SuperfamilyeIF-2-alpha, C-terminal domain 8038509 3001618 SCOP2B (2022-06-29)
TA [auth r]SCOP2B SuperfamilyeIF2alpha middle domain-like 8042150 3001761 SCOP2B (2022-06-29)
WA [auth v]SCOP2B SuperfamilyWinged helix DNA-binding domain 8091486 3000034 SCOP2B (2022-06-29)
WA [auth v]SCOP2B SuperfamilyTPR-like 8091483 3001345 SCOP2B (2022-06-29)
ZA [auth y]SCOP2B SuperfamilyWinged helix DNA-binding domain 8093051 3000034 SCOP2B (2022-06-29)
ZA [auth y]SCOP2B SuperfamilyTPR-like 8093044 3001345 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 1]PF08662Eukaryotic translation initiation factor eIF2A (eIF2A)Eukaryotic translation initiation factor eIF2A- Repeat
A [auth 1]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
B [auth 2]PF12894Anaphase-promoting complex subunit 4 WD40 domain (ANAPC4_WD40)Anaphase-promoting complex subunit 4 WD40 domain- Repeat
B [auth 2]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
C [auth 3]PF10075CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K)CSN8/PSMD8/EIF3K family- Family
D [auth 4]PF13012Maintenance of mitochondrial structure and function (MitMem_reg)Maintenance of mitochondrial structure and function- Family
E [auth 5]PF10255RNA polymerase I-associated factor PAF67 (Paf67)RNA polymerase I-associated factor PAF67- Repeat
F [auth 6]PF18005eIF3 subunit M, C-terminal helix (eIF3m_C_helix)eIF3 subunit M, C-terminal helixThis is the C-terminal helix domain found in Eukaryotic translation initiation factor 3 subunit M (eIF3m). In mammalian eIF3a, the C-terminal helix following the PCI domain is involved in interactions with other core subunits [1].Domain
F [auth 6]PF01399PCI domain (PCI)PCI domainThis domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1].Domain
H [auth 8]PF19445C-terminal region of eIF3h (eIF3h_C)C-terminal region of eIF3h- Family
H [auth 8]PF01398JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB)JAB1/Mov34/MPN/PAD-1 ubiquitin protease- Family
I [auth 9]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
J [auth A]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
K [auth B]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
K [auth B]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
K [auth B]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
L [auth C]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
L [auth C]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
L [auth C]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
L [auth C]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
L [auth C]PF00467KOW motif (KOW)KOW motif- Family
M [auth D]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
M [auth D]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
M [auth D]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
N [auth E]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
O [auth F]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
Q [auth H]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
Q [auth H]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
R [auth I]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
R [auth I]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
S [auth J]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
T [auth K]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
U [auth L]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
U [auth L]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
V [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
W [auth N]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
W [auth N]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
W [auth N]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
X [auth O]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
Y [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
Z [auth Q]PF01176Translation initiation factor 1A / IF-1 (eIF-1a)Translation initiation factor 1A / IF-1This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1.Domain
AA [auth R]PF07541Eukaryotic translation initiation factor 2 alpha subunit (EIF_2_alpha)Eukaryotic translation initiation factor 2 alpha subunit- Family
AA [auth R]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
AA [auth R]PF00575S1 RNA binding domain (S1)S1 RNA binding domainThe S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure.Domain
BA [auth S]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
DA [auth V]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
EA [auth Y]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
FA [auth Z]PF07650KH domain (KH_2)KH domain- Domain
FA [auth Z]PF01873Domain found in IF2B/IF5 (eIF-5_eIF-2B)Domain found in IF2B/IF5- Family
FA [auth Z]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
CA [auth T]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
CA [auth T]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]Eukaryotic translation initiation factor 3 subunit B
B [auth 2]Eukaryotic translation initiation factor 3 subunit I
C [auth 3]Eukaryotic translation initiation factor 3 subunit K
D [auth 4]Eukaryotic translation initiation factor 3 subunit F
E [auth 5]Eukaryotic translation initiation factor 3 subunit L
F [auth 6]Eukaryotic translation initiation factor 3 subunit M
G [auth 7]mRNA---
H [auth 8]Eukaryotic translation initiation factor 3 subunit H
I [auth 9]60S ribosomal protein L41
J [auth A]18S rRNA---
K [auth B]40S ribosomal protein S11
L [auth C]40S ribosomal protein S4, X isoform
M [auth D]40S ribosomal protein S9
N [auth E]40S ribosomal protein S23
O [auth F]40S ribosomal protein S30
P [auth G]40S ribosomal protein S7
Q [auth H]40S ribosomal protein S27
R [auth I]40S ribosomal protein S13
S [auth J]40S ribosomal protein S15a
T [auth K]40S ribosomal protein S21
U [auth L]40S ribosomal protein S2
V [auth M]40S ribosomal protein S17
W [auth N]40S ribosomal protein SA
X [auth O]40S ribosomal protein S3a
Y [auth P]40S ribosomal protein S14
Z [auth Q]40S ribosomal protein S26
AA [auth R]40S ribosomal protein S8
BA [auth S]40S ribosomal protein S6
DA [auth V]40S ribosomal protein S5
EA [auth Y]40S ribosomal protein S16
FA [auth Z]40S ribosomal protein S3
GA [auth a]40S ribosomal protein S10
HA [auth b]40S ribosomal protein S15
IA [auth c]Receptor of activated protein C kinase 1
JA [auth d]40S ribosomal protein S19
KA [auth e]40S ribosomal protein S25
LA [auth f]40S ribosomal protein S18
MA [auth h]40S ribosomal protein S20
NA [auth i]40S ribosomal protein S29
OA [auth k]Ubiquitin
PA [auth m]40S ribosomal protein S12
QA [auth n]40S ribosomal protein S28
RA [auth o]Eukaryotic translation initiation factor 3 subunit G
SA [auth q]Eukaryotic translation initiation factor 1A, X-chromosomal
TA [auth r]Eukaryotic translation initiation factor 2 subunit 1
UA [auth t]Eukaryotic translation initiation factor 2 subunit 3
VA [auth u]Eukaryotic translation initiation factor 3 subunit A
WA [auth v]Eukaryotic translation initiation factor 3 subunit E
XA [auth w]Initiator Met-tRNA-i---
YA [auth x]Eukaryotic translation initiation factor 3 subunit D
ZA [auth y]Eukaryotic translation initiation factor 3 subunit C
AB [auth z]Eukaryotic translation initiation factor 5
CA [auth T]40S ribosomal protein S24

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 1]IPR013979Translation initiation factor, beta propellor-like domainDomain
A [auth 1]IPR034363eIF3B, RNA recognition motifDomain
A [auth 1]IPR000504RNA recognition motif domainDomain
A [auth 1]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
A [auth 1]IPR011400Eukaryotic translation initiation factor 3 subunit BFamily
A [auth 1]IPR035979RNA-binding domain superfamilyHomologous Superfamily
A [auth 1]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth 2]IPR027525Eukaryotic translation initiation factor 3 subunit IFamily
B [auth 2]IPR024977Anaphase-promoting complex subunit 4-like, WD40 domainDomain
B [auth 2]IPR019775WD40 repeat, conserved siteConserved Site
B [auth 2]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
B [auth 2]IPR001680WD40 repeatRepeat
B [auth 2]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
C [auth 3]IPR016024Armadillo-type foldHomologous Superfamily
C [auth 3]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth 3]IPR033464CSN8/PSMD8/EIF3KDomain
C [auth 3]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
C [auth 3]IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticHomologous Superfamily
C [auth 3]IPR000717Proteasome component (PCI) domainDomain
C [auth 3]IPR009374Eukaryotic translation initiation factor 3 subunit KFamily
D [auth 4]IPR027531Eukaryotic translation initiation factor 3 subunit FFamily
D [auth 4]IPR024969EIF3F/CSN6-like, C-terminalDomain
D [auth 4]IPR037518MPN domainDomain
D [auth 4]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
E [auth 5]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
E [auth 5]IPR000717Proteasome component (PCI) domainDomain
E [auth 5]IPR019382Translation initiation factor 3 complex subunit LFamily
F [auth 6]IPR016024Armadillo-type foldHomologous Superfamily
F [auth 6]IPR040750eIF3 subunit M, C-terminal helix domainDomain
F [auth 6]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
F [auth 6]IPR027528Eukaryotic translation initiation factor 3 subunit MFamily
F [auth 6]IPR045237Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7Family
F [auth 6]IPR000717Proteasome component (PCI) domainDomain
H [auth 8]IPR027524Eukaryotic translation initiation factor 3 subunit HFamily
H [auth 8]IPR045810eIF3h, C-terminalDomain
H [auth 8]IPR050242JAMM/MPN+ metalloenzymes, peptidase M67AFamily
H [auth 8]IPR037518MPN domainDomain
H [auth 8]IPR000555JAB1/MPN/MOV34 metalloenzyme domainDomain
I [auth 9]IPR007836Large ribosomal subunit protein eS32Family
K [auth B]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
K [auth B]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
K [auth B]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth B]IPR000266Small ribosomal subunit protein uS17Family
K [auth B]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
L [auth C]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
L [auth C]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
L [auth C]IPR013845Small ribosomal subunit protein eS4, central regionDomain
L [auth C]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth C]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
L [auth C]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
L [auth C]IPR002942RNA-binding S4 domainDomain
L [auth C]IPR000876Small ribosomal subunit protein eS4Family
L [auth C]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
L [auth C]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
L [auth C]IPR005824KOWDomain
M [auth D]IPR002942RNA-binding S4 domainDomain
M [auth D]IPR022801Small ribosomal subunit protein uS4Family
M [auth D]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
M [auth D]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
M [auth D]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
M [auth D]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
N [auth E]IPR006032Small ribosomal subunit protein uS12Family
N [auth E]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth E]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
O [auth F]IPR019954Ubiquitin conserved siteConserved Site
O [auth F]IPR000626Ubiquitin-like domainDomain
O [auth F]IPR006846Small ribosomal subunit protein eS30Family
O [auth F]IPR039415Ubiquitin-like protein FUBIDomain
O [auth F]IPR019956Ubiquitin domainDomain
O [auth F]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
P [auth G]IPR000554Small ribosomal subunit protein eS7Family
P [auth G]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
Q [auth H]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
Q [auth H]IPR000592Small ribosomal subunit protein eS27Family
Q [auth H]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
R [auth I]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
R [auth I]IPR000589Small ribosomal subunit protein uS15Family
R [auth I]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
R [auth I]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
S [auth J]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
S [auth J]IPR000630Small ribosomal subunit protein uS8Family
S [auth J]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
T [auth K]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
T [auth K]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
T [auth K]IPR001931Small ribosomal subunit protein eS21Family
U [auth L]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
U [auth L]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
U [auth L]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
U [auth L]IPR000851Small ribosomal subunit protein uS5Family
U [auth L]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
U [auth L]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
U [auth L]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
V [auth M]IPR001210Small ribosomal subunit protein eS17Family
V [auth M]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
V [auth M]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
W [auth N]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
W [auth N]IPR001865Small ribosomal subunit protein uS2Family
W [auth N]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
W [auth N]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
W [auth N]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
W [auth N]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
W [auth N]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
X [auth O]IPR001593Small ribosomal subunit protein eS1Family
X [auth O]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
X [auth O]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
Y [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Y [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
Y [auth P]IPR001971Small ribosomal subunit protein uS11Family
Z [auth Q]IPR047864Ribosomal protein eS26, conserved siteConserved Site
Z [auth Q]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
Z [auth Q]IPR000892Small ribosomal subunit protein eS26Family
AA [auth R]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
AA [auth R]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
AA [auth R]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
AA [auth R]IPR001047Small ribosomal subunit protein eS8Family
BA [auth S]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
BA [auth S]IPR001377Small ribosomal subunit protein eS6Family
BA [auth S]IPR014401Small ribosomal subunit protein eS6-likeFamily
DA [auth V]IPR023798Small ribosomal subunit protein uS7 domainDomain
DA [auth V]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
DA [auth V]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
DA [auth V]IPR000235Small ribosomal subunit protein uS7Family
DA [auth V]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
EA [auth Y]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
EA [auth Y]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EA [auth Y]IPR000754Small ribosomal subunit protein uS9Family
EA [auth Y]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FA [auth Z]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
FA [auth Z]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
FA [auth Z]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
FA [auth Z]IPR004044K Homology domain, type 2Domain
FA [auth Z]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
FA [auth Z]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
FA [auth Z]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
GA [auth a]IPR037447Small ribosomal subunit protein eS10Family
GA [auth a]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
GA [auth a]IPR005326Plectin/eS10, N-terminalDomain
HA [auth b]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
HA [auth b]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
HA [auth b]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
HA [auth b]IPR002222Small ribosomal subunit protein uS19Family
IA [auth c]IPR019775WD40 repeat, conserved siteConserved Site
IA [auth c]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IA [auth c]IPR045223Small ribosomal subunit protein RACK1-likeFamily
IA [auth c]IPR020472G-protein beta WD-40 repeatRepeat
IA [auth c]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IA [auth c]IPR001680WD40 repeatRepeat
JA [auth d]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
JA [auth d]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
JA [auth d]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
JA [auth d]IPR001266Small ribosomal subunit protein eS19Family
KA [auth e]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
KA [auth e]IPR004977Small ribosomal subunit protein eS25Family
LA [auth f]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
LA [auth f]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
LA [auth f]IPR001892Small ribosomal subunit protein uS13Family
LA [auth f]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
MA [auth h]IPR027486Small ribosomal subunit protein uS10 domainDomain
MA [auth h]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
MA [auth h]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
MA [auth h]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
MA [auth h]IPR001848Small ribosomal subunit protein uS10Family
NA [auth i]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
NA [auth i]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
NA [auth i]IPR001209Small ribosomal subunit protein uS14Family
NA [auth i]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
OA [auth k]IPR019954Ubiquitin conserved siteConserved Site
OA [auth k]IPR050158Ubiquitin and ubiquitin-likeFamily
OA [auth k]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth k]IPR000626Ubiquitin-like domainDomain
OA [auth k]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
OA [auth k]IPR002906Small ribosomal subunit protein eS31Domain
OA [auth k]IPR019956Ubiquitin domainDomain
OA [auth k]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
PA [auth m]IPR000530Small ribosomal subunit protein eS12Family
PA [auth m]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
PA [auth m]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
PA [auth m]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
QA [auth n]IPR028626Ribosomal protein eS28 conserved siteConserved Site
QA [auth n]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QA [auth n]IPR000289Small ribosomal subunit protein eS28Family
RA [auth o]IPR000504RNA recognition motif domainDomain
RA [auth o]IPR034240eIF3G, RNA recognition motifDomain
RA [auth o]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
RA [auth o]IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalDomain
RA [auth o]IPR035979RNA-binding domain superfamilyHomologous Superfamily
RA [auth o]IPR017334Eukaryotic translation initiation factor 3 subunit GFamily
SA [auth q]IPR018104Translation initiation factor 1A (eIF-1A), conserved siteConserved Site
SA [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SA [auth q]IPR006196RNA-binding domain, S1, IF1 typeDomain
SA [auth q]IPR001253Translation initiation factor 1A (eIF-1A)Family
TA [auth r]IPR044126IF2a, S1-like domainDomain
TA [auth r]IPR024054Translation initiation factor 2, alpha subunit, middle domain superfamilyHomologous Superfamily
TA [auth r]IPR024055Translation initiation factor 2, alpha subunit, C-terminalHomologous Superfamily
TA [auth r]IPR003029S1 domainDomain
TA [auth r]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth r]IPR011488Translation initiation factor 2, alpha subunitFamily
UA [auth t]IPR000795Translational (tr)-type GTP-binding domainDomain
UA [auth t]IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalHomologous Superfamily
UA [auth t]IPR004161Translation elongation factor EFTu-like, domain 2Domain
UA [auth t]IPR050543Eukaryotic Initiation Factor 2 Gamma SubunitFamily
UA [auth t]IPR044128Initiation factor eIF2 gamma, GTP-binding domainDomain
UA [auth t]IPR015256Initiation factor eIF2 gamma, C-terminalDomain
UA [auth t]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
UA [auth t]IPR044127Initiation factor eIF2 gamma, domain 2Domain
UA [auth t]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
VA [auth u]IPR027512Eukaryotic translation initiation factor 3 subunit AFamily
VA [auth u]IPR000717Proteasome component (PCI) domainDomain
WA [auth v]IPR016650Eukaryotic translation initiation factor 3 subunit EFamily
WA [auth v]IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalDomain
WA [auth v]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
WA [auth v]IPR000717Proteasome component (PCI) domainDomain
YA [auth x]IPR007783Eukaryotic translation initiation factor 3 subunit DFamily
ZA [auth y]IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainDomain
ZA [auth y]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
ZA [auth y]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
ZA [auth y]IPR027516Eukaryotic translation initiation factor 3 subunit CFamily
ZA [auth y]IPR000717Proteasome component (PCI) domainDomain
AB [auth z]IPR016190Translation initiation factor IF2/IF5, zinc-bindingHomologous Superfamily
AB [auth z]IPR016024Armadillo-type foldHomologous Superfamily
AB [auth z]IPR016189Translation initiation factor IF2/IF5, N-terminalHomologous Superfamily
AB [auth z]IPR003307W2 domainDomain
AB [auth z]IPR002735Translation initiation factor IF2/IF5 domainDomain
AB [auth z]IPR045196Translation initiation factor IF2/IF5Family
CA [auth T]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
CA [auth T]IPR001976Small ribosomal subunit protein eS24Family
CA [auth T]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth T]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 1]PharosP55884
B [auth 2]PharosQ13347
C [auth 3]PharosQ9UBQ5
D [auth 4]PharosO00303
F [auth 6]PharosQ7L2H7
H [auth 8]PharosO15372
I [auth 9]PharosP62945
K [auth B]PharosP62280
L [auth C]PharosP62701
M [auth D]PharosP46781
N [auth E]PharosP62266
O [auth F]PharosP62861
P [auth G]PharosP62081
Q [auth H]PharosP42677
R [auth I]PharosP62277
S [auth J]PharosP62244
T [auth K]PharosP63220
U [auth L]PharosP15880
V [auth M]PharosP08708
W [auth N]PharosP08865
Y [auth P]PharosP62263
Z [auth Q]PharosP62854
AA [auth R]PharosP62241
BA [auth S]PharosP62753
DA [auth V]PharosP46782
EA [auth Y]PharosP62249
FA [auth Z]PharosP23396
GA [auth a]PharosP46783
HA [auth b]PharosP62841
IA [auth c]PharosP63244
JA [auth d]PharosP39019
KA [auth e]PharosP62851
LA [auth f]PharosP62269
MA [auth h]PharosP60866
NA [auth i]PharosP62273
OA [auth k]PharosP62979
PA [auth m]PharosP25398
QA [auth n]PharosP62857
RA [auth o]PharosO75821
SA [auth q]PharosP47813
TA [auth r]PharosP05198
UA [auth t]PharosP41091
VA [auth u]PharosQ14152
WA [auth v]PharosP60228
YA [auth x]PharosO15371
ZA [auth y]PharosQ99613
AB [auth z]PharosP55010
CA [auth T]PharosP62847