8JSI | pdb_00008jsi

Cryo-EM structure of a DNA-protein complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae8jsiA01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
D [auth B]DNA_topoisoIVe8jsiB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: DNA_topoisoIVECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth B]		Argonaute family protein - -
B [auth T],
E [auth U]		DNA (5'-D(P*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*C)-3')---
C [auth G],
F [auth H]		DNA (5'-D(P*GP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*T)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth B]		IPR055253Argonaute, N-terminal domain, thermococcalesDomain
A,
D [auth B]		IPR021103Argonaute PAZ domain, archaeaDomain
A,
D [auth B]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
A,
D [auth B]		IPR036085PAZ domain superfamilyHomologous Superfamily
A,
D [auth B]		IPR003165Piwi domainDomain
A,
D [auth B]		IPR003100PAZ domainDomain
A,
D [auth B]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily