8GZ7
Octahedral supramolecular assembly of the bicomponent gamma-hemolysin octameric pore complexes from Staphylococcus aureus Newman.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Leukocidin-like | 8037946 | 3000256 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Leukocidin-like | 8037946 | 3000256 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | Leukocidin-like | 8037946 | 3000256 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Leukocidin-like | 8037946 | 3000256 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Leukocidin-like | 8074054 | 3000256 | SCOP2B (2022-06-29) |
F [auth D] | SCOP2B Superfamily | Leukocidin-like | 8074054 | 3000256 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Leukocidin-like | 8074054 | 3000256 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Leukocidin-like | 8074054 | 3000256 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e8gz7A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth C] | F_UNCLASSIFIED | e8gz7C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth E] | F_UNCLASSIFIED | e8gz7E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth G] | F_UNCLASSIFIED | e8gz7G1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth B] | F_UNCLASSIFIED | e8gz7B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth D] | F_UNCLASSIFIED | e8gz7D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth F] | F_UNCLASSIFIED | e8gz7F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
H | F_UNCLASSIFIED | e8gz7H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | PF07968 | Leukocidin/Hemolysin toxin family (Leukocidin) | Leukocidin/Hemolysin toxin family | - | Domain |
E [auth B], F [auth D], G [auth F], H | PF07968 | Leukocidin/Hemolysin toxin family (Leukocidin) | Leukocidin/Hemolysin toxin family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | Gamma-hemolysin component B | |||
E [auth B], F [auth D], G [auth F], H | Gamma-hemolysin component A |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E], D [auth G] | IPR016183 | Leukocidin/Hemolysin toxin | Domain |
A, B [auth C], C [auth E], D [auth G] | IPR036435 | Leukocidin/porin MspA superfamily | Homologous Superfamily |
A, B [auth C], C [auth E], D [auth G] | IPR003963 | Bi-component toxin, staphylococci | Family |
E [auth B], F [auth D], G [auth F], H | IPR016183 | Leukocidin/Hemolysin toxin | Domain |
E [auth B], F [auth D], G [auth F], H | IPR036435 | Leukocidin/porin MspA superfamily | Homologous Superfamily |
E [auth B], F [auth D], G [auth F], H | IPR003963 | Bi-component toxin, staphylococci | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Pore-forming beta-sheet toxins | Aerolysin (n=14,S=14 or n=16,S=16) |