8GJ1
E. coli clamp loader with open clamp on primed template DNA (form 2)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104157 | 3002834 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Post-AAA+ oligomerization domain-like | 8034551 | 3000691 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8034535 | 3002019 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104152 | 3002834 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Post-AAA+ oligomerization domain-like | 8034547 | 3000691 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8034548 | 3002019 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Post-AAA+ oligomerization domain-like | 8034547 | 3000691 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8034548 | 3002019 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104152 | 3002834 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104152 | 3002834 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8034548 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Post-AAA+ oligomerization domain-like | 8034547 | 3000691 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Post-AAA+ oligomerization domain-like | 8038004 | 3000691 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | DNA clamp | 8038082 | 3000780 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | DNA clamp | 8038081 | 3000780 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | DNA clamp | 8038076 | 3000780 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | DNA clamp | 8038081 | 3000780 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | DNA clamp | 8038082 | 3000780 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | DNA clamp | 8038076 | 3000780 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06144 | DNA polymerase III, delta subunit (DNA_pol3_delta) | DNA polymerase III, delta subunit | DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction [1]. The delta subunit is also known as ... | Domain | |
PF14840 | Processivity clamp loader gamma complex DNA pol III C-term (DNA_pol3_delt_C) | Processivity clamp loader gamma complex DNA pol III C-term | - | Family | |
PF12169 | DNA polymerase III subunits gamma and tau domain III (DNA_pol3_gamma3) | DNA polymerase III subunits gamma and tau domain III | - | Family | |
PF22608 | DNA polymerase III clamp loader subunit, ATPase lid domain (DNAX_ATPase_lid) | DNA polymerase III clamp loader subunit, ATPase lid domain | This entry represents the AAA+ ATPase lid domain of DNA polymerase III clamp loader subunit [1-4]. | Domain | |
PF13177 | DNA polymerase III, delta subunit (DNA_pol3_delta2) | DNA polymerase III, delta subunit | DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction [1]. The delta subunit is also known as ... | Domain | |
PF09115 | DNA polymerase III, delta subunit, C terminal (DNApol3-delta_C) | DNA polymerase III, delta subunit, C terminal | Members of this family, which are predominantly found in prokaryotic DNA polymerase III, assume an alpha helical structure, with a core of five alpha helices, and an additional small helix. They are essential for the formation of the polymerase clamp ... | Domain | |
PF13177 | DNA polymerase III, delta subunit (DNA_pol3_delta2) | DNA polymerase III, delta subunit | DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction [1]. The delta subunit is also known as ... | Domain | |
PF21500 | DNA polymerase III subunit delta', AAA+ ATPase lid domain (HolB_lid) | DNA polymerase III subunit delta', AAA+ ATPase lid domain | DNA polymerase III subunit delta' is part of the beta sliding clamp loading complex, which hydrolyses ATP to load the beta clamp onto primed DNA to form the DNA replication pre-initiation complex [1,2]. It consists of three domains, of which the N-te ... | Domain | |
PF03603 | DNA polymerase III psi subunit (DNA_III_psi) | DNA polymerase III psi subunit | - | Family | |
G [auth H], H [auth I] | PF02768 | DNA polymerase III beta subunit, C-terminal domain (DNA_pol3_beta_3) | DNA polymerase III beta subunit, C-terminal domain | A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold. | Domain |
G [auth H], H [auth I] | PF02767 | DNA polymerase III beta subunit, central domain (DNA_pol3_beta_2) | DNA polymerase III beta subunit, central domain | A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold. | Domain |
G [auth H], H [auth I] | PF00712 | DNA polymerase III beta subunit, N-terminal domain (DNA_pol3_beta) | DNA polymerase III beta subunit, N-terminal domain | A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold. | Domain |