Structure of the CwlD amidase from Clostridioides difficile in complex with the GerS lipoprotein
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Metallophos | e7ragB1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Metallophos | ECOD (v295.2) |
| A | Metallophos | e7ragA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Metallophos | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01520 | N-acetylmuramoyl-L-alanine amidase (Amidase_3) | N-acetylmuramoyl-L-alanine amidase | This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Germination-specific N-acetylmuramoyl-L-alanine amidase, Autolysin |
| |||
| Lipoprotein | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR014234 | N-acetylmuramoyl-L-alanine amidase CwlD | Family | |
| IPR050695 | N-acetylmuramoyl-L-alanine amidase 3 | Family | |
| IPR002508 | N-acetylmuramoyl-L-alanine amidase, catalytic domain | Domain | |
| IPR060034 | Sporulation protein YdcC-like | Family | |
| IPR029046 | Lipoprotein localisation LolA/LolB/LppX | Homologous Superfamily |














