Structure of the CwlD amidase from Clostridioides difficile in complex with the GerS lipoprotein
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Metallophos | e7ragB1 | A: beta barrels | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Metallophos | ECOD (v294.2) |
| A | Metallophos | e7ragA1 | A: beta barrels | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: Metallophos | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01520 | N-acetylmuramoyl-L-alanine amidase (Amidase_3) | N-acetylmuramoyl-L-alanine amidase | This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR014234 | N-acetylmuramoyl-L-alanine amidase CwlD | Family | |
| IPR050695 | N-acetylmuramoyl-L-alanine amidase 3 | Family | |
| IPR002508 | N-acetylmuramoyl-L-alanine amidase, catalytic domain | Domain | |
| IPR029046 | Lipoprotein localisation LolA/LolB/LppX | Homologous Superfamily |














