7UXH

cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	8036936	3001600	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)	8036936	3001600	SCOP2B (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Ras-like P-loop GTPases	8093372	3002022	SCOP2B (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8093374	3001810	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ras-like P-loop GTPases	8093372	3002022	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Roadblock/LC7 domain-like	8093374	3001810	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ras-like P-loop GTPases	8093372	3002022	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Roadblock/LC7 domain-like	8093374	3001810	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Roadblock/LC7 domain-like	8093374	3001810	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ras-like P-loop GTPases	8093372	3002022	SCOP2B (2022-06-29)
DA [auth d]	SCOP2B Superfamily	Ras-like P-loop GTPases	8093371	3002022	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ras-like P-loop GTPases	8093371	3002022	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ras-like P-loop GTPases	8093371	3002022	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ras-like P-loop GTPases	8093371	3002022	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Roadblock/LC7 domain-like	8040242	3001810	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Roadblock/LC7 domain-like	8040242	3001810	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Roadblock/LC7 domain-like	8040242	3001810	SCOP2B (2022-06-29)
GA [auth g]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8040242	3001810	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8092495	3001810	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Roadblock/LC7 domain-like	8092495	3001810	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Roadblock/LC7 domain-like	8092495	3001810	SCOP2B (2022-06-29)
IA [auth i]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8092495	3001810	SCOP2B (2022-06-29)
FA [auth f]	SCOP2B Superfamily	Roadblock/LC7 domain-like	8088845	3001810	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Roadblock/LC7 domain-like	8088845	3001810	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Roadblock/LC7 domain-like	8088845	3001810	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Roadblock/LC7 domain-like	8088845	3001810	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	ANAPC4_WD40_9	e7uxhB1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_9	ECOD (1.6)
D	ANAPC4_WD40_9	e7uxhD1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: ANAPC4_WD40_9	ECOD (1.6)
E	KOG1517	e7uxhE2	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: KOG1517	ECOD (1.6)
E	Raptor_N,KOG1517,Arm	e7uxhE1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Raptor_N,KOG1517,Arm	ECOD (1.6)
E	Raptor_N	e7uxhE3	A: a/b three-layered sandwiches	X: Caspase-like (From Topology)	H: Caspase-like (From Topology)	T: Caspase-like	F: Raptor_N	ECOD (1.6)
U	KOG1517	e7uxhU2	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: KOG1517	ECOD (1.6)
U	Raptor_N,KOG1517,Arm	e7uxhU1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Raptor_N,KOG1517,Arm	ECOD (1.6)
U	Raptor_N	e7uxhU3	A: a/b three-layered sandwiches	X: Caspase-like (From Topology)	H: Caspase-like (From Topology)	T: Caspase-like	F: Raptor_N	ECOD (1.6)
CA [auth c]	Gtr1_RagA_C_1	e7uxhc1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C_1	ECOD (1.6)
CA [auth c]	Gtr1_RagA_N	e7uxhc2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
F	Gtr1_RagA_C_1	e7uxhF1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C_1	ECOD (1.6)
F	Gtr1_RagA_N	e7uxhF2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
M	Gtr1_RagA_C_1	e7uxhM1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C_1	ECOD (1.6)
M	Gtr1_RagA_N	e7uxhM2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
V	Gtr1_RagA_C_1	e7uxhV2	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C_1	ECOD (1.6)
V	Gtr1_RagA_N	e7uxhV1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
DA [auth d]	Gtr1_RagA_C	e7uxhd1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C	ECOD (1.6)
DA [auth d]	Gtr1_RagA_N	e7uxhd2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
G	Gtr1_RagA_C	e7uxhG2	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C	ECOD (1.6)
G	Gtr1_RagA_N	e7uxhG1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
N	Gtr1_RagA_C	e7uxhN2	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C	ECOD (1.6)
N	Gtr1_RagA_N	e7uxhN1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
W	Gtr1_RagA_C	e7uxhW2	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Gtr1_RagA_C	ECOD (1.6)
W	Gtr1_RagA_N	e7uxhW1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Gtr1_RagA_N	ECOD (1.6)
J	MAPKK1_Int	e7uxhJ1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: MAPKK1_Int	ECOD (1.6)
Q	MAPKK1_Int	e7uxhQ1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: MAPKK1_Int	ECOD (1.6)
Z	MAPKK1_Int	e7uxhZ1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: MAPKK1_Int	ECOD (1.6)
GA [auth g]	MAPKK1_Int	e7uxhg1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: MAPKK1_Int	ECOD (1.6)
HA [auth h]	Robl_LC7	e7uxhh1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
K	Robl_LC7	e7uxhK1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
R	Robl_LC7	e7uxhR1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
AA [auth a]	Robl_LC7	e7uxha1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
BA [auth b]	LAMTOR5	e7uxhb1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: LAMTOR5	ECOD (1.6)
L	LAMTOR5	e7uxhL1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: LAMTOR5	ECOD (1.6)
S	LAMTOR5	e7uxhS1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: LAMTOR5	ECOD (1.6)
IA [auth i]	LAMTOR5	e7uxhi1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: LAMTOR5	ECOD (1.6)
FA [auth f]	Robl_LC7	e7uxhf1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
I	Robl_LC7	e7uxhI1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
P	Robl_LC7	e7uxhP1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)
Y	Robl_LC7	e7uxhY1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Robl_LC7	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF02260	FATC domain (FATC)	FATC domain	-	Family
A, C	PF04670	Gtr1/RagA G protein conserved region (Gtr1_RagA)	Gtr1/RagA G protein conserved region	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of ...	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].	Domain
A, C	PF08771	FKBP12-rapamycin binding domain (FRB_dom)	FKBP12-rapamycin binding domain	The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ...	The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapamycin binding domain (FRB) of the TOR proteins. This entry represents the FRB domain [1, 2].	Domain
A, C	PF00454	Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase)	Phosphatidylinositol 3- and 4-kinase	-	Family
A, C	PF11865	Serine/threonine-protein kinase mTOR domain (mTOR_dom)	Serine/threonine-protein kinase mTOR domain	-	Repeat
A, C	PF02259	FAT domain (FAT)	FAT domain	-	Repeat
B, D	PF16672	Ragulator complex protein LAMTOR5 (LAMTOR5)	Ragulator complex protein LAMTOR5	-	Domain
B, D	PF04670	Gtr1/RagA G protein conserved region (Gtr1_RagA)	Gtr1/RagA G protein conserved region	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of ...	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].	Domain
B, D	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
E, U	PF14538	Raptor N-terminal CASPase like domain (Raptor_N)	Raptor N-terminal CASPase like domain	This domain is found at the N-terminus of the Raptor protein. It has been identified to have a CASPase like structure [1]. It conserves the characteristic cys/his dyad of the caspases suggesting it may have a peptidase activity.	Domain
E, U	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
E, U	PF02985	HEAT repeat (HEAT)	HEAT repeat	-	Repeat
CA [auth c], F, M, V	PF04670	Gtr1/RagA G protein conserved region (Gtr1_RagA)	Gtr1/RagA G protein conserved region	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of ...	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].	Domain
CA [auth c], F, M, V	PF03259	Roadblock/LC7 domain (Robl_LC7)	Roadblock/LC7 domain	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	Domain
DA [auth d], G, N, W	PF04670	Gtr1/RagA G protein conserved region (Gtr1_RagA)	Gtr1/RagA G protein conserved region	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of ...	GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].	Domain
DA [auth d], G, N, W	PF08923	Mitogen-activated protein kinase kinase 1 interacting (MAPKK1_Int)	Mitogen-activated protein kinase kinase 1 interacting	Mitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a tw ...	Mitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a two alpha-helix and a one alpha-helix layer [1].	Domain
GA [auth g], J, Q, Z	PF08923	Mitogen-activated protein kinase kinase 1 interacting (MAPKK1_Int)	Mitogen-activated protein kinase kinase 1 interacting	Mitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a tw ...	Mitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a two alpha-helix and a one alpha-helix layer [1].	Domain
GA [auth g], J, Q, Z	PF15951	MITF/TFEB/TFEC/TFE3 N-terminus (MITF_TFEB_C_3_N)	MITF/TFEB/TFEC/TFE3 N-terminus	-	Family
BA [auth b], IA [auth i], L, S	PF16672	Ragulator complex protein LAMTOR5 (LAMTOR5)	Ragulator complex protein LAMTOR5	-	Domain
JA [auth j], T	PF15951	MITF/TFEB/TFEC/TFE3 N-terminus (MITF_TFEB_C_3_N)	MITF/TFEB/TFEC/TFE3 N-terminus	-	Family
FA [auth f], I, P, Y	PF16672	Ragulator complex protein LAMTOR5 (LAMTOR5)	Ragulator complex protein LAMTOR5	-	Domain
FA [auth f], I, P, Y	PF03259	Roadblock/LC7 domain (Robl_LC7)	Roadblock/LC7 domain	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...	This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C	Serine/threonine-protein kinase mTOR	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding sequence-specific DNA binding RNA polymerase III transcription regulatory region sequence-specific DNA binding RNA polymerase III type 2 promoter sequence-specific DNA binding double-stranded DNA binding nucleic acid binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding RNA polymerase III cis-regulatory region sequence-specific DNA binding transcription regulatory region nucleic acid binding protein serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups ribonucleoprotein complex binding protein-containing complex binding ribosome binding phosphoprotein binding protein binding rDNA binding 5S rDNA binding RNA polymerase III type 1 promoter sequence-specific DNA binding identical protein binding transcription factor binding TFIIIC-class transcription factor complex binding RNA polymerase III general transcription initiation factor binding general transcription initiation factor binding protein serine kinase activity RNA polymerase III type 3 promoter sequence-specific DNA binding	calcineurin-NFAT signaling cascade cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation intracellular signal transduction cell communication calcium-mediated signaling intracellular signaling cassette cellular process signal transduction calcineurin-mediated signaling calcineurin-NFAT signaling cascade cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation intracellular signal transduction cell communication calcium-mediated signaling intracellular signaling cassette cellular process signal transduction calcineurin-mediated signaling catabolic process macroautophagy cellular metabolic process autophagy regulation of cellular metabolic process regulation of catabolic process regulation of autophagy cellular catabolic process regulation of macroautophagy regulation of cellular catabolic process metabolic process regulation of metabolic process process utilizing autophagic mechanism regulation of cellular component organization autophagosome organization cellular component biogenesis cellular component organization cellular component assembly cellular component organization or biogenesis autophagosome assembly organelle assembly vacuole organization regulation of autophagosome assembly regulation of vacuole organization regulation of cellular component biogenesis regulation of organelle organization organelle organization regulation of organelle assembly regulation of cellular component size regulation of biological quality regulation of cell size regulation of anatomical structure size organonitrogen compound catabolic process organonitrogen compound metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process regulation of growth growth regulation of cell growth cell growth TOR signaling TORC1 signaling developmental process heart development multicellular organismal process heart valve development animal organ development circulatory system development multicellular organism development anatomical structure morphogenesis heart valve morphogenesis anatomical structure development system development behavior response to stress multicellular organismal response to stress response to pain behavioral response to pain cellular response to nutrient levels response to nutrient levels cellular response to stress response to starvation cellular response to starvation cellular developmental process regulation of developmental process positive regulation of biological process regulation of cell differentiation regulation of striated muscle cell differentiation muscle cell differentiation myotube differentiation muscle structure development positive regulation of developmental process positive regulation of myotube differentiation positive regulation of cell differentiation cell differentiation positive regulation of striated muscle cell differentiation regulation of myotube differentiation positive regulation of cellular process positive regulation of muscle cell differentiation regulation of muscle cell differentiation striated muscle cell differentiation protein phosphorylation phosphorylation macromolecule modification phosphate-containing compound metabolic process protein modification process phosphorus metabolic process positive regulation of locomotion regulation of cell motility regulation of keratinocyte migration positive regulation of cell migration positive regulation of epithelial cell migration tissue migration ameboidal-type cell migration positive regulation of cell motility regulation of cell migration cell migration regulation of multicellular organismal process epithelial cell migration cell motility regulation of epithelial cell migration locomotion epithelium migration regulation of locomotion positive regulation of keratinocyte migration keratinocyte migration negative regulation of cellular catabolic process negative regulation of catabolic process negative regulation of metabolic process negative regulation of biological process negative regulation of cellular metabolic process negative regulation of autophagy negative regulation of cellular process response to osmotic stress cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus cellular response to chemical stimulus response to chemical response to abiotic stimulus cellular response to abiotic stimulus cellular biosynthetic process positive regulation of protein metabolic process organonitrogen compound biosynthetic process positive regulation of translation positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process translational initiation regulation of biosynthetic process regulation of translational initiation regulation of protein metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of translation regulation of macromolecule biosynthetic process positive regulation of translational initiation positive regulation of cellular biosynthetic process multicellular organism growth developmental growth anoikis apoptotic process cell death programmed cell death cellular response to acid chemical cellular response to nitrogen compound cellular response to amino acid stimulus response to organonitrogen compound response to endogenous stimulus response to oxygen-containing compound response to nitrogen compound response to amino acid cellular response to L-leucine cellular response to oxygen-containing compound cellular response to endogenous stimulus response to acid chemical cellular response to organonitrogen compound response to L-leucine negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction negative regulation of cell communication negative regulation of calcineurin-NFAT signaling cascade regulation of intracellular signal transduction regulation of calcineurin-mediated signaling regulation of calcium-mediated signaling regulation of calcineurin-NFAT signaling cascade regulation of signaling negative regulation of response to stimulus negative regulation of calcium-mediated signaling negative regulation of signal transduction regulation of response to stimulus regulation of cell communication negative regulation of calcineurin-mediated signaling response to heat response to temperature stimulus positive regulation of cell growth positive regulation of growth pyridine nucleotide catabolic process oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process regulation of generation of precursor metabolites and energy nucleoside phosphate catabolic process organic acid metabolic process regulation of ATP metabolic process regulation of purine nucleotide catabolic process regulation of small molecule metabolic process regulation of phosphate metabolic process regulation of nucleotide metabolic process small molecule metabolic process purine ribonucleotide catabolic process nucleoside phosphate metabolic process pyruvate metabolic process purine nucleoside diphosphate metabolic process purine-containing compound catabolic process regulation of purine nucleotide metabolic process nucleobase-containing compound catabolic process positive regulation of ATP metabolic process nucleoside diphosphate metabolic process regulation of phosphorus metabolic process positive regulation of carbohydrate metabolic process monocarboxylic acid metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process ATP metabolic process positive regulation of purine nucleotide catabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process positive regulation of glycolytic process purine-containing compound metabolic process positive regulation of catabolic process ADP metabolic process purine ribonucleoside diphosphate metabolic process purine ribonucleoside diphosphate catabolic process ribonucleotide catabolic process positive regulation of phosphate metabolic process nucleobase-containing compound metabolic process positive regulation of nucleotide catabolic process glycolytic process pyridine-containing compound metabolic process regulation of nucleobase-containing compound metabolic process pyridine nucleotide metabolic process nicotinamide nucleotide metabolic process regulation of carbohydrate catabolic process positive regulation of nucleobase-containing compound metabolic process positive regulation of phosphorus metabolic process nucleotide metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process regulation of nucleotide catabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process positive regulation of nucleotide metabolic process purine nucleotide metabolic process ribonucleotide metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process regulation of carbohydrate metabolic process ribonucleoside triphosphate metabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process carbohydrate metabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy regulation of glycolytic process positive regulation of purine nucleotide metabolic process organophosphate metabolic process positive regulation of cellular catabolic process positive regulation of small molecule metabolic process voluntary musculoskeletal movement multicellular organismal movement musculoskeletal movement system process nervous system process neuromuscular process sexual reproduction reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation germ cell development rhythmic process circadian rhythm regulation of circadian rhythm negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death negative regulation of apoptotic process regulation of epithelial to mesenchymal transition positive regulation of epithelial to mesenchymal transition mesenchyme development tissue development epithelial to mesenchymal transition positive regulation of multicellular organismal process mesenchymal cell differentiation regulation of cytoskeleton organization regulation of actin filament-based process actin cytoskeleton organization regulation of actin cytoskeleton organization actin filament-based process cytoskeleton organization cellular response to methionine response to nutrient response to methionine cellular response to nutrient myeloid leukocyte differentiation regulation of leukocyte differentiation regulation of cell development regulation of osteoclast differentiation osteoclast differentiation regulation of immune system process regulation of multicellular organismal development hemopoiesis regulation of myeloid cell differentiation regulation of myeloid leukocyte differentiation myeloid cell differentiation immune system process regulation of hemopoiesis leukocyte differentiation positive regulation of organelle organization positive regulation of cellular component organization regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly positive regulation of protein polymerization protein-containing complex assembly regulation of actin filament polymerization protein polymerization actin polymerization or depolymerization regulation of actin filament organization actin filament polymerization protein-containing complex organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization actin filament organization regulation of actin polymerization or depolymerization positive regulation of supramolecular fiber organization regulation of protein polymerization regulation of actin filament length regulation of supramolecular fiber organization supramolecular fiber organization positive regulation of actin filament polymerization cardiac muscle cell development striated muscle tissue development muscle cell development cardiac cell development muscle tissue development cardiac muscle tissue development cardiac muscle cell differentiation cardiocyte differentiation heart process circulatory system process cardiac muscle contraction heart contraction muscle contraction muscle system process blood circulation striated muscle contraction pyrimidine-containing compound metabolic process nucleobase biosynthetic process pyrimidine nucleobase biosynthetic process pyrimidine nucleobase metabolic process nucleobase metabolic process 'de novo' pyrimidine nucleobase biosynthetic process pyrimidine-containing compound biosynthetic process defense response inflammatory response signal transduction by p53 class mediator regulation of signal transduction by p53 class mediator response to peptide hormone cellular response to peptide hormone stimulus response to hormone response to insulin cellular response to insulin stimulus cellular response to hormone stimulus protein localization regulation of localization cellular localization regulation of protein localization regulation of protein localization to nucleus protein localization to nucleus negative regulation of protein localization to nucleus localization regulation of cellular localization cellular macromolecule localization macromolecule localization protein localization to organelle negative regulation of protein localization DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase I rRNA transcription regulation of transcription by RNA polymerase I positive regulation of RNA metabolic process regulation of DNA-templated transcription regulation of transcription of nucleolar large rRNA by RNA polymerase I positive regulation of DNA-templated transcription RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process rRNA metabolic process positive regulation of transcription by RNA polymerase I regulation of RNA biosynthetic process nucleolar large rRNA transcription by RNA polymerase I nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA biosynthetic process positive regulation of transcription of nucleolar large rRNA by RNA polymerase I cell projection organization plasma membrane bounded cell projection assembly regulation of lamellipodium assembly regulation of lamellipodium organization positive regulation of cell projection organization lamellipodium assembly plasma membrane bounded cell projection organization regulation of cell projection organization regulation of cell projection assembly positive regulation of lamellipodium assembly positive regulation of lamellipodium organization regulation of plasma membrane bounded cell projection assembly lamellipodium organization cell projection assembly regulation of plasma membrane bounded cell projection organization positive regulation of plasma membrane bounded cell projection assembly regulation of actin filament bundle assembly positive regulation of actin filament bundle assembly actin filament bundle organization positive regulation of stress fiber assembly stress fiber assembly actomyosin structure organization regulation of stress fiber assembly contractile actin filament bundle assembly regulation of actomyosin structure organization actin filament bundle assembly negative regulation of cell size regulation of protein modification process positive regulation of phosphorylation regulation of protein phosphorylation peptidyl-tyrosine modification positive regulation of peptidyl-tyrosine phosphorylation positive regulation of protein modification process peptidyl-amino acid modification positive regulation of protein phosphorylation regulation of peptidyl-tyrosine phosphorylation regulation of phosphorylation peptidyl-tyrosine phosphorylation DNA damage response positive regulation of phosphoprotein phosphatase activity protein dephosphorylation regulation of phosphatase activity regulation of catalytic activity positive regulation of phosphatase activity positive regulation of dephosphorylation regulation of dephosphorylation dephosphorylation regulation of molecular function regulation of hydrolase activity regulation of phosphoprotein phosphatase activity positive regulation of molecular function regulation of protein dephosphorylation positive regulation of catalytic activity positive regulation of protein dephosphorylation positive regulation of hydrolase activity protein destabilization regulation of protein stability response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels response to hypoxia response to oxygen levels regulation of amide metabolic process regulation of pentose-phosphate shunt pentose-phosphate shunt positive regulation of pentose-phosphate shunt glucose 6-phosphate metabolic process regulation of NADP metabolic process amide metabolic process NADP metabolic process NADPH regeneration protein autophosphorylation heart morphogenesis animal organ morphogenesis ruffle organization peptidyl-serine modification peptidyl-serine phosphorylation regulation of leukocyte activation regulation of cell activation positive regulation of leukocyte cell-cell adhesion lymphocyte activation leukocyte cell-cell adhesion leukocyte activation positive regulation of cell-cell adhesion positive regulation of lymphocyte activation positive regulation of cell activation cell adhesion cell-cell adhesion T cell activation positive regulation of leukocyte activation regulation of cell-cell adhesion positive regulation of immune system process positive regulation of T cell activation positive regulation of cell adhesion regulation of cell adhesion cell activation regulation of T cell activation lymphocyte costimulation regulation of leukocyte cell-cell adhesion T cell costimulation regulation of lymphocyte activation cellular response to amino acid starvation response to amino acid starvation cellular response to heat regulation of cellular response to heat regulation of cellular response to stress regulation of response to stress negative regulation of lysosome organization negative regulation of cellular component organization lytic vacuole organization lysosome organization negative regulation of organelle organization regulation of lysosome organization regulation of myelination nervous system development regulation of nervous system development myelination axon ensheathment ensheathment of neurons neurogenesis central nervous system development gliogenesis oligodendrocyte differentiation glial cell differentiation cellular response to leucine starvation negative regulation of macroautophagy positive regulation of cytoplasmic translational initiation regulation of cytoplasmic translational initiation cytoplasmic translation cytoplasmic translational initiation regulation of cytoplasmic translation regulation of response to wounding positive regulation of response to stimulus response to wounding regulation of wound healing, spreading of epidermal cells positive regulation of response to wounding wound healing epithelium development positive regulation of wound healing, spreading of epidermal cells morphogenesis of an epithelium epiboly involved in wound healing morphogenesis of an epithelial sheet wound healing, spreading of epidermal cells tissue morphogenesis positive regulation of wound healing regulation of wound healing epiboly wound healing, spreading of cells regulation of lipid metabolic process lipid biosynthetic process positive regulation of lipid biosynthetic process positive regulation of lipid metabolic process regulation of lipid biosynthetic process lipid metabolic process positive regulation of cell communication regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signal transduction positive regulation of intracellular signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signaling energy derivation by oxidation of organic compounds energy reserve metabolic process organelle localization nucleus localization action potential transmission of nerve impulse neuronal action potential regulation of membrane potential rhythmic behavior regulation of behavior circadian behavior locomotory behavior regulation of locomotor rhythm locomotor rhythm adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains CD4-positive or CD8-positive, alpha-beta T cell lineage commitment T-helper 1 cell lineage commitment mononuclear cell differentiation lymphocyte differentiation cell activation involved in immune response CD4-positive, alpha-beta T cell differentiation CD4-positive, alpha-beta T cell differentiation involved in immune response alpha-beta T cell differentiation involved in immune response alpha-beta T cell differentiation T cell activation involved in immune response alpha-beta T cell activation involved in immune response CD4-positive, alpha-beta T cell activation leukocyte activation involved in immune response alpha-beta T cell activation T cell differentiation CD4-positive, alpha-beta T cell lineage commitment lymphocyte activation involved in immune response T-helper cell differentiation immune response alpha-beta T cell lineage commitment T cell differentiation involved in immune response T-helper 1 type immune response T-helper cell lineage commitment T cell lineage commitment adaptive immune response immune effector process positive T cell selection T-helper 1 cell differentiation T cell selection cell fate commitment positive regulation of transcription by RNA polymerase III transcription by RNA polymerase III regulation of transcription by RNA polymerase III positive regulation of nervous system development regulation of neurogenesis regulation of gliogenesis positive regulation of gliogenesis positive regulation of neurogenesis positive regulation of oligodendrocyte differentiation regulation of glial cell differentiation positive regulation of cell development positive regulation of glial cell differentiation regulation of oligodendrocyte differentiation post-embryonic development regulation of membrane permeability	membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system cytoplasm cytosol Golgi membrane Golgi apparatus membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system cytoplasm cytosol Golgi membrane Golgi apparatus membrane bounding membrane of organelle organelle membrane protein-containing complex TORC1 complex TOR complex intracellular protein-containing complex intracellular vesicle phagocytic vesicle cytoplasmic vesicle vesicle endocytic vesicle lytic vacuole vacuole lysosome organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection vacuolar membrane lytic vacuole membrane lysosomal membrane mitochondrial membrane mitochondrion organelle outer membrane mitochondrial envelope mitochondrial outer membrane outer membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen TORC2 complex nuclear body PML body
B, D	Target of rapamycin complex subunit LST8	enzyme regulator activity protein serine/threonine kinase activator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of biological process regulation of growth regulation of cellular process regulation of cellular component organization positive regulation of biological process biological regulation growth positive regulation of cell growth cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of biological process regulation of growth regulation of cellular process regulation of cellular component organization positive regulation of biological process biological regulation growth positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular component organization or biogenesis positive regulation of cellular process pyridine nucleotide catabolic process oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process regulation of generation of precursor metabolites and energy nucleoside phosphate catabolic process organic acid metabolic process regulation of primary metabolic process regulation of ATP metabolic process cellular catabolic process regulation of purine nucleotide catabolic process regulation of small molecule metabolic process regulation of phosphate metabolic process regulation of nucleotide metabolic process phosphate-containing compound metabolic process small molecule metabolic process purine ribonucleotide catabolic process nucleoside phosphate metabolic process organonitrogen compound catabolic process pyruvate metabolic process cellular metabolic process purine nucleoside diphosphate metabolic process primary metabolic process purine-containing compound catabolic process regulation of purine nucleotide metabolic process nucleobase-containing compound catabolic process positive regulation of ATP metabolic process nucleoside diphosphate metabolic process metabolic process regulation of phosphorus metabolic process positive regulation of carbohydrate metabolic process monocarboxylic acid metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process ATP metabolic process positive regulation of purine nucleotide catabolic process positive regulation of cellular metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process positive regulation of glycolytic process purine-containing compound metabolic process positive regulation of catabolic process ADP metabolic process purine ribonucleoside diphosphate metabolic process purine ribonucleoside diphosphate catabolic process ribonucleotide catabolic process positive regulation of phosphate metabolic process nucleobase-containing compound metabolic process positive regulation of metabolic process positive regulation of nucleotide catabolic process glycolytic process pyridine-containing compound metabolic process regulation of nucleobase-containing compound metabolic process phosphorus metabolic process pyridine nucleotide metabolic process nicotinamide nucleotide metabolic process regulation of carbohydrate catabolic process positive regulation of nucleobase-containing compound metabolic process positive regulation of phosphorus metabolic process regulation of cellular metabolic process nucleotide metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process regulation of nucleotide catabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process regulation of metabolic process catabolic process positive regulation of nucleotide metabolic process purine nucleotide metabolic process ribonucleotide metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process regulation of carbohydrate metabolic process ribonucleoside triphosphate metabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process carbohydrate metabolic process organonitrogen compound metabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy regulation of catabolic process regulation of glycolytic process positive regulation of purine nucleotide metabolic process organophosphate metabolic process regulation of cellular catabolic process positive regulation of cellular catabolic process positive regulation of small molecule metabolic process negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus response to hypoxia response to chemical response to oxygen levels response to abiotic stimulus cellular response to nutrient levels response to nutrient levels positive regulation of cell communication positive regulation of signal transduction signaling regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction TOR signaling regulation of signaling regulation of TOR signaling positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling regulation of cytoskeleton organization regulation of actin filament-based process actin cytoskeleton organization regulation of organelle organization organelle organization regulation of actin cytoskeleton organization actin filament-based process cytoskeleton organization TORC1 signaling regulation of biosynthetic process regulation of lipid metabolic process lipid biosynthetic process positive regulation of lipid biosynthetic process biosynthetic process positive regulation of biosynthetic process positive regulation of lipid metabolic process regulation of lipid biosynthetic process lipid metabolic process regulation of amide metabolic process regulation of pentose-phosphate shunt pentose-phosphate shunt positive regulation of pentose-phosphate shunt glucose 6-phosphate metabolic process regulation of NADP metabolic process amide metabolic process NADP metabolic process NADPH regeneration positive regulation of organelle organization positive regulation of cellular component organization regulation of cellular component size cellular component biogenesis regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly cellular component assembly positive regulation of protein polymerization protein-containing complex assembly regulation of actin filament polymerization regulation of biological quality protein polymerization actin polymerization or depolymerization regulation of actin filament organization actin filament polymerization protein-containing complex organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization actin filament organization regulation of actin polymerization or depolymerization positive regulation of supramolecular fiber organization regulation of cellular component biogenesis regulation of protein polymerization regulation of actin filament length regulation of supramolecular fiber organization supramolecular fiber organization positive regulation of actin filament polymerization regulation of anatomical structure size negative regulation of cellular catabolic process negative regulation of catabolic process negative regulation of metabolic process autophagy regulation of autophagy negative regulation of cellular metabolic process negative regulation of autophagy process utilizing autophagic mechanism response to osmotic stress cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus cellular response to abiotic stimulus regulation of protein modification process positive regulation of phosphorylation regulation of protein phosphorylation positive regulation of protein metabolic process peptidyl-tyrosine modification positive regulation of peptidyl-tyrosine phosphorylation positive regulation of protein modification process peptidyl-amino acid modification positive regulation of macromolecule metabolic process protein metabolic process protein modification process positive regulation of protein phosphorylation protein phosphorylation phosphorylation regulation of protein metabolic process regulation of peptidyl-tyrosine phosphorylation regulation of macromolecule metabolic process macromolecule modification regulation of phosphorylation macromolecule metabolic process peptidyl-tyrosine phosphorylation	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen TORC2 complex protein-containing complex TOR complex intracellular protein-containing complex vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome TORC1 complex
E, U	Regulatory-associated protein of mTOR	small GTPase binding protein binding binding enzyme binding GTPase binding protein-macromolecule adaptor activity molecular adaptor activity 14-3-3 protein binding protein-containing complex binding enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity small GTPase binding protein binding binding enzyme binding GTPase binding protein-macromolecule adaptor activity molecular adaptor activity 14-3-3 protein binding protein-containing complex binding enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity enzyme-substrate adaptor activity kinase binding protein kinase binding protein kinase inhibitor activity molecular function inhibitor activity enzyme inhibitor activity protein serine/threonine kinase inhibitor activity kinase inhibitor activity	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process response to chemical response to xenobiotic stimulus response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus response to hypoxia cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process response to chemical response to xenobiotic stimulus response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus response to hypoxia response to oxygen levels response to abiotic stimulus cellular component organization regulation of cellular component size biological regulation cellular component organization or biogenesis regulation of biological quality regulation of cell size regulation of anatomical structure size cellular response to nutrient levels response to nutrient levels positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling regulation of growth regulation of cellular component organization growth regulation of cell growth cell growth TORC1 signaling positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process regulation of peptidyl-serine phosphorylation positive regulation of cellular metabolic process positive regulation of phosphate metabolic process peptidyl-serine modification regulation of primary metabolic process positive regulation of metabolic process positive regulation of protein modification process peptidyl-serine phosphorylation regulation of phosphate metabolic process phosphate-containing compound metabolic process peptidyl-amino acid modification positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein phosphorylation phosphorus metabolic process protein modification process organonitrogen compound metabolic process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation cellular metabolic process regulation of protein metabolic process regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process positive regulation of peptidyl-serine phosphorylation macromolecule modification regulation of phosphorus metabolic process metabolic process regulation of phosphorylation macromolecule metabolic process regulation of metabolic process regulation of cell cycle phase transition cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition mitotic cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle phase transition positive regulation of cell cycle process positive regulation of mitotic cell cycle cell cycle regulation of cell cycle cell cycle process positive regulation of G1/S transition of mitotic cell cycle regulation of cell cycle process positive regulation of cell cycle regulation of mitotic cell cycle phase transition positive regulation of cell cycle G1/S phase transition mitotic cell cycle process regulation of G1/S transition of mitotic cell cycle positive regulation of cell cycle phase transition G1/S transition of mitotic cell cycle mitotic cell cycle phase transition regulation of amide metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process regulation of generation of precursor metabolites and energy nucleobase-containing compound metabolic process regulation of small molecule metabolic process regulation of nucleotide metabolic process regulation of pentose-phosphate shunt pentose-phosphate shunt pyridine-containing compound metabolic process small molecule metabolic process regulation of nucleobase-containing compound metabolic process pyridine nucleotide metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process regulation of carbohydrate catabolic process positive regulation of nucleobase-containing compound metabolic process nucleotide metabolic process regulation of purine nucleotide metabolic process positive regulation of pentose-phosphate shunt catabolic process positive regulation of nucleotide metabolic process glucose 6-phosphate metabolic process purine nucleotide metabolic process nucleobase-containing small molecule metabolic process regulation of NADP metabolic process amide metabolic process regulation of carbohydrate metabolic process carbohydrate metabolic process generation of precursor metabolites and energy regulation of catabolic process purine-containing compound metabolic process NADP metabolic process positive regulation of purine nucleotide metabolic process NADPH regeneration organophosphate metabolic process positive regulation of small molecule metabolic process response to starvation cellular response to starvation cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical response to amino acid negative regulation of cellular catabolic process negative regulation of catabolic process negative regulation of metabolic process autophagy negative regulation of biological process regulation of autophagy negative regulation of cellular metabolic process cellular catabolic process negative regulation of autophagy regulation of cellular catabolic process negative regulation of cellular process process utilizing autophagic mechanism response to osmotic stress cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus cellular response to abiotic stimulus cellular response to nitrogen compound response to organonitrogen compound response to endogenous stimulus response to oxygen-containing compound response to nitrogen compound cellular response to L-leucine cellular response to oxygen-containing compound cellular response to endogenous stimulus cellular response to organonitrogen compound response to L-leucine positive regulation of cell growth positive regulation of growth pyridine nucleotide catabolic process oxoacid metabolic process organophosphate catabolic process nucleoside phosphate catabolic process organic acid metabolic process regulation of ATP metabolic process regulation of purine nucleotide catabolic process purine ribonucleotide catabolic process organonitrogen compound catabolic process pyruvate metabolic process purine nucleoside diphosphate metabolic process purine-containing compound catabolic process nucleobase-containing compound catabolic process positive regulation of ATP metabolic process nucleoside diphosphate metabolic process positive regulation of carbohydrate metabolic process monocarboxylic acid metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process ATP metabolic process positive regulation of purine nucleotide catabolic process purine ribonucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process positive regulation of glycolytic process positive regulation of catabolic process ADP metabolic process purine ribonucleoside diphosphate metabolic process purine ribonucleoside diphosphate catabolic process ribonucleotide catabolic process positive regulation of nucleotide catabolic process glycolytic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process regulation of nucleotide catabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process ribonucleotide metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process ribonucleoside triphosphate metabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process ADP catabolic process carboxylic acid metabolic process regulation of glycolytic process positive regulation of cellular catabolic process regulation of peptidyl-threonine phosphorylation peptidyl-threonine modification positive regulation of peptidyl-threonine phosphorylation peptidyl-threonine phosphorylation homeostatic process cellular response to glucose stimulus intracellular glucose homeostasis response to hexose cellular response to carbohydrate stimulus cellular homeostasis response to monosaccharide response to carbohydrate chemical homeostasis response to glucose glucose homeostasis carbohydrate homeostasis cellular response to hexose stimulus intracellular chemical homeostasis cellular response to monosaccharide stimulus regulation of biosynthetic process regulation of lipid metabolic process lipid biosynthetic process positive regulation of lipid biosynthetic process biosynthetic process positive regulation of biosynthetic process positive regulation of lipid metabolic process regulation of lipid biosynthetic process lipid metabolic process multicellular organismal process positive regulation of odontoblast differentiation cellular developmental process regulation of developmental process regulation of cell differentiation epithelial cell differentiation regulation of epithelial cell differentiation positive regulation of developmental process multicellular organism development positive regulation of cell differentiation cell differentiation anatomical structure development neuroepithelial cell differentiation regulation of multicellular organismal process odontoblast differentiation developmental process epithelium development regulation of multicellular organismal development regulation of odontoblast differentiation tissue development positive regulation of epithelial cell differentiation columnar/cuboidal epithelial cell differentiation positive regulation of neuroepithelial cell differentiation behavior biological process involved in intraspecies interaction between organisms social behavior cellular biosynthetic process positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase III RNA metabolic process positive regulation of macromolecule biosynthetic process RNA biosynthetic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase III regulation of RNA biosynthetic process regulation of transcription by RNA polymerase III nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription positive regulation of cellular biosynthetic process cell population proliferation positive regulation of cell population proliferation endothelial cell proliferation positive regulation of epithelial cell proliferation regulation of endothelial cell proliferation regulation of cell population proliferation positive regulation of endothelial cell proliferation regulation of epithelial cell proliferation epithelial cell proliferation myeloid leukocyte differentiation regulation of leukocyte differentiation cell development positive regulation of osteoclast differentiation regulation of cell development regulation of osteoclast differentiation positive regulation of hemopoiesis osteoclast differentiation regulation of immune system process positive regulation of immune system process hemopoiesis regulation of myeloid cell differentiation positive regulation of cell development regulation of myeloid leukocyte differentiation positive regulation of myeloid leukocyte differentiation myeloid cell differentiation immune system process positive regulation of myeloid cell differentiation regulation of hemopoiesis positive regulation of multicellular organismal process positive regulation of leukocyte differentiation leukocyte differentiation	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection vacuolar membrane membrane-bounded organelle membrane lytic vacuole intracellular anatomical structure cytoplasm cellular anatomical entity cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection vacuolar membrane membrane-bounded organelle membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle organelle lysosomal membrane organelle membrane lysosome cell body neuronal cell body protein-containing complex TORC1 complex TOR complex intracellular protein-containing complex cytoplasmic ribonucleoprotein granule ribonucleoprotein granule intracellular non-membrane-bounded organelle supramolecular complex non-membrane-bounded organelle cytoplasmic stress granule nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
CA [auth c], F, M, V	Ras-related GTP-binding protein A	phosphoprotein binding protein binding binding protein heterodimerization activity protein dimerization activity guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding phosphoprotein binding protein binding binding protein heterodimerization activity protein dimerization activity guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein-membrane adaptor activity protein-macromolecule adaptor activity molecular adaptor activity identical protein binding protein homodimerization activity ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling apoptotic process cell death programmed cell death positive regulation of TORC1 signaling regulation of TORC1 signaling TORC1 signaling cellular response to stress response to stress response to starvation cellular response to starvation cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical cellular response to chemical stimulus response to chemical response to amino acid protein localization to lysosome protein localization to organelle protein localization to vacuole localization within membrane protein localization to membrane negative regulation of cellular catabolic process negative regulation of catabolic process catabolic process cellular metabolic process negative regulation of metabolic process autophagy negative regulation of biological process regulation of cellular metabolic process regulation of catabolic process regulation of autophagy negative regulation of cellular metabolic process cellular catabolic process negative regulation of autophagy regulation of cellular catabolic process negative regulation of cellular process metabolic process process utilizing autophagic mechanism regulation of metabolic process cell surface receptor signaling pathway response to cytokine cytokine-mediated signaling pathway response to peptide cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway cellular response to cytokine stimulus response to tumor necrosis factor cellular response to amino acid starvation response to amino acid starvation chemical homeostasis homeostatic process glucose homeostasis carbohydrate homeostasis	GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen lytic vacuole vacuole lysosome catalytic complex GTPase complex Gtr1-Gtr2 GTPase complex vacuolar membrane membrane lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane
DA [auth d], G, N, W	Ras-related GTP-binding protein C	protein heterodimerization activity protein binding binding protein dimerization activity guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding protein heterodimerization activity protein binding binding protein dimerization activity guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding organic cyclic compound binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding enzyme binding GTPase binding enzyme-substrate adaptor activity protein-macromolecule adaptor activity molecular adaptor activity cation binding magnesium ion binding metal ion binding GDP binding protein-membrane adaptor activity pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	response to acid chemical response to stimulus response to chemical response to amino acid protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process cellular response to stimulus cellular response to nutrient levels response to nutrient levels TOR signaling response to acid chemical response to stimulus response to chemical response to amino acid protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process cellular response to stimulus cellular response to nutrient levels response to nutrient levels TOR signaling regulation of biological process regulation of signaling regulation of cellular process regulation of TOR signaling signaling biological regulation regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication regulation of TORC1 signaling signal transduction TORC1 signaling apoptotic process cell death programmed cell death cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process positive regulation of cell communication positive regulation of signal transduction positive regulation of biological process positive regulation of TORC1 signaling positive regulation of response to stimulus positive regulation of TOR signaling positive regulation of cellular process positive regulation of intracellular signal transduction positive regulation of signaling cellular response to stress response to stress response to starvation cellular response to starvation RNA splicing RNA processing cellular response to acid chemical cellular response to amino acid stimulus cellular response to chemical stimulus protein localization to lysosome protein localization to organelle protein localization to vacuole localization within membrane protein localization to membrane negative regulation of cellular catabolic process negative regulation of catabolic process catabolic process negative regulation of metabolic process autophagy negative regulation of biological process regulation of cellular metabolic process regulation of catabolic process regulation of autophagy negative regulation of cellular metabolic process cellular catabolic process negative regulation of autophagy regulation of cellular catabolic process negative regulation of cellular process process utilizing autophagic mechanism regulation of metabolic process cellular response to amino acid starvation response to amino acid starvation small GTPase-mediated signal transduction intracellular signaling cassette	GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle intracellular organelle organelle intracellular membrane-bounded organelle nucleus membrane-enclosed lumen GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle intracellular organelle organelle intracellular membrane-bounded organelle nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen lytic vacuole vacuole lysosome catalytic complex GTPase complex Gtr1-Gtr2 GTPase complex vacuolar membrane membrane lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane
EA [auth e], H, O, X	Ragulator complex protein LAMTOR1	protein binding binding enzyme binding GTPase binding protein-membrane adaptor activity protein-macromolecule adaptor activity molecular adaptor activity	protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process organelle localization lysosome localization vacuolar localization cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus positive regulation of cell communication protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process organelle localization lysosome localization vacuolar localization cellular response to stimulus cellular response to nutrient levels response to nutrient levels response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling regulation of growth regulation of cellular component organization growth regulation of cell growth cell growth cellular component organization cellular component organization or biogenesis TORC1 signaling regulation of sterol transport regulation of localization transport regulation of transport lipid localization lipid transport regulation of lipid transport regulation of cholesterol import organic hydroxy compound transport establishment of localization regulation of lipid localization cholesterol transport sterol transport regulation of cholesterol transport cholesterol import sterol homeostasis chemical homeostasis homeostatic process cholesterol homeostasis lipid homeostasis lysosome organization organelle organization vacuole organization lytic vacuole organization positive regulation of TORC1 signaling regulation of TORC1 signaling regulation of protein localization protein localization to vacuole regulation of protein localization to lysosome protein localization to lysosome positive regulation of protein localization to lysosome regulation of cellular localization protein localization to organelle positive regulation of protein localization establishment of localization in cell intracellular transport vesicle-mediated transport endosomal transport intracellular signaling cassette positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade regulation of cholesterol efflux cholesterol efflux cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical cellular response to chemical stimulus response to chemical response to amino acid localization within membrane protein localization to membrane regulation of receptor recycling regulation of macromolecule metabolic process receptor recycling receptor metabolic process metabolic process macromolecule metabolic process regulation of metabolic process vesicle organization endosome organization endomembrane system organization	membrane-bounded organelle intracellular anatomical structure membrane intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system specific granule membrane intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle membrane-bounded organelle intracellular anatomical structure membrane intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system specific granule membrane intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle organelle membrane secretory granule membrane specific granule GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle lytic vacuole lysosome vacuolar membrane azurophil granule vacuole lytic vacuole membrane lysosomal membrane primary lysosome azurophil granule membrane cell periphery plasma membrane membrane microdomain membrane raft Ragulator complex membrane protein complex guanyl-nucleotide exchange factor complex intracellular protein-containing complex endosome membrane endosome late endosome membrane late endosome ficolin-1-rich granule membrane ficolin-1-rich granule tertiary granule
GA [auth g], J, Q, Z	Ragulator complex protein LAMTOR3	enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity kinase regulator activity	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling positive regulation of signaling intracellular signaling cassette positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical cellular response to chemical stimulus response to chemical response to amino acid protein localization to cell junction	membrane-bounded organelle intracellular anatomical structure tertiary granule membrane membrane intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system tertiary granule intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle membrane-bounded organelle intracellular anatomical structure tertiary granule membrane membrane intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system tertiary granule intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle organelle membrane secretory granule membrane anchoring junction cell junction focal adhesion cell-substrate junction specific granule membrane specific granule vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle endosome membrane endosome cell periphery plasma membrane Ragulator complex membrane protein complex guanyl-nucleotide exchange factor complex intracellular protein-containing complex late endosome membrane late endosome
AA [auth a], HA [auth h], K, R	Ragulator complex protein LAMTOR4	-	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling positive regulation of signaling cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical cellular response to chemical stimulus response to chemical response to amino acid protein localization to lysosome protein localization localization cellular localization protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to vacuole cellular component organization regulation of cellular component size cellular component organization or biogenesis regulation of biological quality regulation of cell size regulation of anatomical structure size	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole cellular anatomical entity intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole cellular anatomical entity intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle organelle lysosomal membrane cytoplasm organelle membrane lysosome GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex Ragulator complex membrane protein complex guanyl-nucleotide exchange factor complex intracellular protein-containing complex endosome membrane endosome intracellular vesicle late endosome membrane endomembrane system cytoplasmic vesicle membrane cytoplasmic vesicle vesicle membrane late endosome vesicle
BA [auth b], IA [auth i], L, S	Ragulator complex protein LAMTOR5	-	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling positive regulation of signaling multicellular organismal process positive regulation of interleukin-8 production cellular biosynthetic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production regulation of multicellular organismal process positive regulation of macromolecule metabolic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process interleukin-8 production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of multicellular organismal process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process positive regulation of cellular biosynthetic process regulation of interleukin-8 production positive regulation of canonical NF-kappaB signal transduction intracellular signaling cassette canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction protein localization regulation of localization cellular localization regulation of protein localization positive regulation of protein localization to nucleus regulation of protein localization to nucleus protein localization to nucleus localization regulation of cellular localization cellular macromolecule localization macromolecule localization protein localization to organelle positive regulation of protein localization negative regulation of hydrolase activity negative regulation of proteolysis regulation of catalytic activity negative regulation of biological process negative regulation of catalytic activity regulation of programmed cell death negative regulation of endopeptidase activity regulation of primary metabolic process negative regulation of peptidase activity regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of proteolysis proteolysis regulation of endopeptidase activity negative regulation of cellular process negative regulation of cysteine-type endopeptidase activity involved in apoptotic process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of cysteine-type endopeptidase activity organonitrogen compound metabolic process negative regulation of programmed cell death regulation of protein metabolic process regulation of apoptotic process negative regulation of metabolic process regulation of peptidase activity negative regulation of molecular function primary metabolic process cell death regulation of molecular function negative regulation of apoptotic process regulation of hydrolase activity negative regulation of cysteine-type endopeptidase activity apoptotic process programmed cell death positive regulation of DNA-binding transcription factor activity positive regulation of NF-kappaB transcription factor activity RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process positive regulation of molecular function nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of DNA-binding transcription factor activity regulation of DNA-templated transcription cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical cellular response to chemical stimulus response to chemical response to amino acid protein localization to lysosome protein localization to vacuole cellular component organization regulation of cellular component size cellular component organization or biogenesis regulation of biological quality regulation of cell size regulation of anatomical structure size viral genome replication viral process viral life cycle biological process involved in interspecies interaction between organisms response to other organism response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus regulation of DNA binding regulation of binding regulation of transcription regulatory region DNA binding positive regulation of binding regulation of RNA polymerase II regulatory region sequence-specific DNA binding positive regulation of DNA binding positive regulation of RNA polymerase II regulatory region sequence-specific DNA binding positive regulation of transcription regulatory region DNA binding	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole cellular anatomical entity intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole cellular anatomical entity intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle organelle lysosomal membrane cytoplasm organelle membrane lysosome GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex cytosol Ragulator complex membrane protein complex guanyl-nucleotide exchange factor complex intracellular protein-containing complex endosome membrane endosome intracellular vesicle late endosome membrane endomembrane system cytoplasmic vesicle membrane cytoplasmic vesicle vesicle membrane late endosome vesicle
JA [auth j], T	Transcription factor EB	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding organic cyclic compound binding nucleic acid binding transcription regulatory region nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding organic cyclic compound binding nucleic acid binding transcription regulatory region nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription factor activity, RNA polymerase II-specific protein binding protein dimerization activity enzyme binding	response to stimulus immune response immune system process adaptive immune response humoral immune response localization organelle localization lysosome localization vacuolar localization cellular catabolic process catabolic process cellular metabolic process autophagy cellular process response to stimulus immune response immune system process adaptive immune response humoral immune response localization organelle localization lysosome localization vacuolar localization cellular catabolic process catabolic process cellular metabolic process autophagy cellular process metabolic process process utilizing autophagic mechanism developmental process multicellular organismal process placenta development chordate embryonic development animal organ development embryo development in utero embryonic development multicellular organism development embryonic placenta development embryo development ending in birth or egg hatching anatomical structure development embryonic organ development cellular component organization lysosome organization organelle organization vacuole organization lytic vacuole organization cellular component organization or biogenesis cellular response to stimulus cellular response to nutrient levels response to nutrient levels cellular response to stress response to stress response to starvation cellular response to starvation regulation of cellular process cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of nucleobase-containing compound metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process positive regulation of cellular biosynthetic process transcription by RNA polymerase II regulation of transcription by RNA polymerase II cellular response to amino acid starvation response to amino acid starvation positive regulation of transcription by RNA polymerase II positive regulation of autophagy regulation of catabolic process regulation of autophagy positive regulation of catabolic process regulation of cellular catabolic process positive regulation of cellular catabolic process biological process involved in interspecies interaction between organisms response to other organism defense response defense response to symbiont response to external stimulus antibacterial innate immune response response to biotic stimulus defense response to bacterium defense response to other organism response to bacterium innate immune response response to external biotic stimulus	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol intracellular organelle protein-containing complex protein-DNA complex organelle intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle vacuolar membrane membrane-bounded organelle intracellular anatomical structure cytoplasm cellular anatomical entity cytosol intracellular organelle protein-containing complex protein-DNA complex organelle intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle vacuolar membrane membrane-bounded organelle membrane lytic vacuole vacuole intracellular membrane-bounded organelle lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome nucleus
FA [auth f], I, P, Y	Ragulator complex protein LAMTOR2	GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor activity nucleoside-triphosphatase regulator activity molecular function regulator activity molecular adaptor activity	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction positive regulation of TORC1 signaling intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of TOR signaling signal transduction regulation of TORC1 signaling positive regulation of cellular process TOR signaling regulation of biological process regulation of signaling regulation of TOR signaling biological regulation positive regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication cellular process TORC1 signaling positive regulation of signaling intracellular signaling cassette positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular response to acid chemical cellular response to amino acid stimulus response to acid chemical cellular response to chemical stimulus response to chemical response to amino acid cellular component organization cell junction organization regulation of cellular component organization cell-substrate junction organization regulation of cell-substrate junction organization cellular component organization or biogenesis protein localization to cell junction regulation of growth growth regulation of cell growth cell growth ameboidal-type cell migration cell migration fibroblast migration cell motility	membrane-bounded organelle intracellular anatomical structure tertiary granule membrane membrane intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system tertiary granule intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle membrane-bounded organelle intracellular anatomical structure tertiary granule membrane membrane intracellular vesicle cellular anatomical entity intracellular membrane-bounded organelle endomembrane system tertiary granule intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle organelle membrane secretory granule membrane specific granule membrane specific granule vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome GTPase activator complex protein-containing complex FNIP-folliculin RagC/D GAP enzyme activator complex endosome membrane endosome cell periphery plasma membrane Ragulator complex membrane protein complex guanyl-nucleotide exchange factor complex intracellular protein-containing complex late endosome late endosome membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR016024	Armadillo-type fold	Homologous Superfamily
A, C	IPR009076	FKBP12-rapamycin binding domain	Domain
A, C	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A, C	IPR018936	Phosphatidylinositol 3/4-kinase, conserved site	Conserved Site
A, C	IPR036940	Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily	Homologous Superfamily
A, C	IPR014009	PIK-related kinase	Domain
A, C	IPR026683	Serine/threonine-protein kinase TOR, catalytic domain	Domain
A, C	IPR003151	PIK-related kinase, FAT	Domain
A, C	IPR036738	FKBP12-rapamycin binding domain superfamily	Homologous Superfamily
A, C	IPR003152	FATC domain	Domain
A, C	IPR024585	Serine/threonine-protein kinase mTOR domain	Domain
A, C	IPR011989	Armadillo-like helical	Homologous Superfamily
A, C	IPR000403	Phosphatidylinositol 3-/4-kinase, catalytic domain	Domain
A, C	IPR050517	DNA Damage Response and Repair Kinase	Family
A, C	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B, D	IPR019775	WD40 repeat, conserved site	Conserved Site
B, D	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	Homologous Superfamily
B, D	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B, D	IPR001680	WD40 repeat	Repeat
B, D	IPR037588	Target of rapamycin complex subunit LST8	Family
B, D	IPR020472	G-protein beta WD-40 repeat	Repeat
E, U	IPR016024	Armadillo-type fold	Homologous Superfamily
E, U	IPR004083	Regulatory associated protein of TOR	Family
E, U	IPR029347	Raptor, N-terminal CASPase-like domain	Domain
E, U	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
E, U	IPR000357	HEAT repeat	Repeat
E, U	IPR011989	Armadillo-like helical	Homologous Superfamily
E, U	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
E, U	IPR001680	WD40 repeat	Repeat
CA [auth c], F, M, V	IPR039397	RagA/B	Family
CA [auth c], F, M, V	IPR006762	Gtr1/RagA G protein	Family
CA [auth c], F, M, V	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
DA [auth d], G, N, W	IPR006762	Gtr1/RagA G protein	Family
DA [auth d], G, N, W	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
DA [auth d], G, N, W	IPR039400	RagC/D	Family
EA [auth e], H, O, X	IPR028209	LAMTOR1/MEH1	Family
GA [auth g], J, Q, Z	IPR015019	Ragulator complex protein LAMTOR3	Family
AA [auth a], HA [auth h], K, R	IPR034601	Ragulator complex protein LAMTOR4	Family
BA [auth b], IA [auth i], L, S	IPR024135	Ragulator complex protein LAMTOR5	Family
JA [auth j], T	IPR024098	Transcription factor EB, bHLHzip domain	Domain
JA [auth j], T	IPR021802	MiT/TFE transcription factors, C-terminal	Domain
JA [auth j], T	IPR031867	MiT/TFE transcription factors, N-terminal	Domain
JA [auth j], T	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	Domain
JA [auth j], T	IPR036638	Helix-loop-helix DNA-binding domain superfamily	Homologous Superfamily
FA [auth f], I, P, Y	IPR037587	Ragulator complex protein LAMTOR2-like	Family
FA [auth f], I, P, Y	IPR004942	Roadblock/LAMTOR2 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, C	Pharos: P42345	renal cell carcinoma mantle cell lymphoma Precursor T-Cell Lymphoblastic Leukemia-Lymphoma sarcomatoid renal cell carcinoma chromophobe renal cell carcinoma macrocephaly-intellectual disability-neurodevelopmental disorder-small thorax syndrome adenocarcinoma granular cell carcinoma hypertensive disorder intellectual disability schizophrenia tubular adenocarcinoma papillary renal cell carcinoma isolated focal cortical dysplasia type II cancer renal cell carcinoma mantle cell lymphoma Precursor T-Cell Lymphoblastic Leukemia-Lymphoma sarcomatoid renal cell carcinoma chromophobe renal cell carcinoma macrocephaly-intellectual disability-neurodevelopmental disorder-small thorax syndrome adenocarcinoma granular cell carcinoma hypertensive disorder intellectual disability schizophrenia tubular adenocarcinoma papillary renal cell carcinoma isolated focal cortical dysplasia type II cancer cervical cancer collecting duct carcinoma cribriform carcinoma of breast epilepsy ovarian mucinous adenocarcinoma acute T cell leukemia glioblastoma hyperglycemia bladder carcinoma in situ inborn carbohydrate metabolic disorder kidney disease small cell lung carcinoma liver disease toxic encephalopathy connective tissue disease urinary bladder neoplasm mesothelioma obesity disorder ovarian neoplasm renal carcinoma benign mesothelioma breast disease thyroid gland carcinoma cerebral cortical dysplasia lung disease clear cell renal carcinoma lymphatic system disease urinary bladder cancer major depressive disorder cribriform carcinoma metastatic melanoma neurodegenerative disease ovarian cancer hepatocellular carcinoma bladder benign neoplasm small cell carcinoma lung large cell carcinoma type 2 diabetes mellitus urinary bladder carcinoma
B, D	Pharos: Q9BVC4	atrial fibrillation dilated cardiomyopathy psoriasis
E, U	Pharos: Q8N122	nicotine dependence hypertensive disorder Sjogren syndrome Tobacco Dependence
CA [auth c], F, M, V	Pharos: Q7L523	large cell medulloblastoma prostate carcinoma ovarian cancer skin basal cell carcinoma pancreatic ductal adenocarcinoma
DA [auth d], G, N, W	Pharos: Q9HB90	follicular lymphoma Lymphoma, Follicular, Grade 3 osteosarcoma
EA [auth e], H, O, X	Pharos: Q6IAA8	malignant pancreatic neoplasm pancreatic ductal adenocarcinoma
GA [auth g], J, Q, Z	Pharos: Q9UHA4	atypical teratoid rhabdoid tumor interstitial cystitis pancreatic ductal adenocarcinoma psoriasis breast cancer large cell medulloblastoma pancreatic intraductal papillary-mucinous neoplasm glioblastoma ovarian cancer plasma cell myeloma
AA [auth a], HA [auth h], K, R	Pharos: Q0VGL1	osteosarcoma ovarian cancer psoriasis
BA [auth b], IA [auth i], L, S	Pharos: O43504	breast carcinoma breast cancer lymphoplasmacytic lymphoma Mammary Neoplasms, Human plasma cell myeloma ovarian cancer glucose intolerance pancreatic ductal adenocarcinoma
JA [auth j], T	Pharos: P19484	colorectal cancer medulloblastoma ovarian cancer hereditary spastic paraplegia microphthalmia pituitary cancer large cell medulloblastoma MIT family translocation renal cell carcinoma
FA [auth f], I, P, Y	Pharos: Q9Y2Q5	primary immunodeficiency syndrome due to p14 deficiency breast cancer osteosarcoma Sjogren syndrome pancreatic ductal adenocarcinoma tuberculosis