7UG7

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth SJ]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
K [auth SK]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
L [auth SL]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
M [auth SM]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
N [auth SN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
O [auth SO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
P [auth SP]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
Q [auth SQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
S [auth SS]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
B [auth SB]SCOP2 FamilyRibosomal protein S2-like 8107571 4003744 SCOP2 (2022-06-29)
B [auth SB]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8107572 3001397 SCOP2 (2022-06-29)
B [auth SB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
U [auth SU]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
Y [auth LB]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
Y [auth LB]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
Z [auth LC]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
AA [auth LD]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
BA [auth LE]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
CA [auth LF]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
CA [auth LF]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
DA [auth LI]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
DA [auth LI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
FA [auth LK]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
FA [auth LK]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
GA [auth LM]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
HA [auth LN]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
IA [auth LO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
JA [auth LP]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
KA [auth LQ]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
LA [auth LR]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
MA [auth LS]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
D [auth SD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
NA [auth LT]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
OA [auth LU]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
PA [auth LV]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
QA [auth LW]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
RA [auth LX]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
SA [auth LY]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
TA [auth La]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
UA [auth Lb]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
VA [auth Lc]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
WA [auth Ld]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
XA [auth Le]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
YA [auth Lf]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
ZA [auth Lg]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
BB [auth Li]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
CB [auth Lj]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
F [auth SF]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
G [auth SG]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
H [auth SH]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
I [auth SI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth SJ]Ribosomal_S10e7ug7SJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
K [auth SK]Ribosomal_S11e7ug7SK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
L [auth SL]Ribosom_S12_S23e7ug7SL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth SM]Ribosomal_S13_1e7ug7SM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
N [auth SN]Ribosomal_S14_1e7ug7SN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
O [auth SO]Ribosomal_S15_1e7ug7SO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
P [auth SP]Ribosomal_S16e7ug7SP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
Q [auth SQ]Ribosomal_S17_1e7ug7SQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
R [auth SR]Ribosomal_S18e7ug7SR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
S [auth SS]Ribosomal_S19e7ug7SS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
B [auth SB]Ribosomal_S2e7ug7SB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
T [auth ST]Ribosomal_S20pe7ug7ST1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
U [auth SU]Ribosomal_S21e7ug7SU1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21ECOD (1.6)
X [auth LA]Ribosomal_L1_2nd_1e7ug7LA1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
Y [auth LB]Ribosomal_L2_1e7ug7LB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
Y [auth LB]Ribosomal_L2_Ce7ug7LB2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
Z [auth LC]Ribosomal_L3e7ug7LC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
AA [auth LD]Ribosomal_L4e7ug7LD1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
BA [auth LE]Ribosomal_L5_Ce7ug7LE1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
CA [auth LF]Ribosomal_L6e7ug7LF2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
CA [auth LF]Ribosomal_L6_1e7ug7LF1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
C [auth SC]Ribosomal_S3_Ce7ug7SC2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth SC]KH_2_1e7ug7SC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
DA [auth LI]Ribosomal_L9_Ne7ug7LI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
DA [auth LI]Ribosomal_L9_C_1e7ug7LI2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_C_1ECOD (1.6)
EA [auth LJ]Ribosomal_L10e7ug7LJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
FA [auth LK]Ribosomal_L11e7ug7LK2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
FA [auth LK]Ribosomal_L11_Ne7ug7LK1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
GA [auth LM]Ribosomal_L13e7ug7LM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
HA [auth LN]Ribosomal_L14e7ug7LN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
IA [auth LO]Ribosomal_L27Ae7ug7LO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
JA [auth LP]Ribosomal_L16e7ug7LP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
KA [auth LQ]Ribosomal_L17_1e7ug7LQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
LA [auth LR]Ribosomal_L18pe7ug7LR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
MA [auth LS]Ribosomal_L19e7ug7LS1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
D [auth SD]S4e7ug7SD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
NA [auth LT]Ribosomal_L20e7ug7LT1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
OA [auth LU]Ribosomal_L21pe7ug7LU1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
PA [auth LV]Ribosomal_L22e7ug7LV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
QA [auth LW]Ribosomal_L23_2e7ug7LW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
RA [auth LX]ribosomal_L24_1e7ug7LX1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
SA [auth LY]Ribosomal_L25pe7ug7LY1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
TA [auth La]Ribosomal_L27e7ug7La1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
UA [auth Lb]Ribosomal_L28e7ug7Lb1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
VA [auth Lc]Ribosomal_L29e7ug7Lc1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
WA [auth Ld]Ribosomal_L30e7ug7Ld1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
E [auth SE]Ribosomal_S5_Ce7ug7SE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth SE]Ribosomal_S5e7ug7SE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
XA [auth Le]Ribosomal_L31e7ug7Le1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
YA [auth Lf]Ribosomal_L32pe7ug7Lf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
ZA [auth Lg]Ribosomal_L33e7ug7Lg1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
AB [auth Lh]Ribosomal_L34e7ug7Lh1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
BB [auth Li]Ribosomal_L35pe7ug7Li1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
CB [auth Lj]Ribosomal_L36e7ug7Lj1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
DB [auth EF]GTP_EFTU_D2e7ug7EF4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
DB [auth EF]EFG_IVe7ug7EF5 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
DB [auth EF]EFG_Ce7ug7EF1 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
DB [auth EF]EFG_IIe7ug7EF2 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
DB [auth EF]MnmE_helical_2nde7ug7EF3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
F [auth SF]Ribosomal_S6e7ug7SF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
G [auth SG]Ribosomal_S7_1e7ug7SG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
H [auth SH]Ribosomal_S8_Ne7ug7SH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth SH]Ribosomal_S8_Ce7ug7SH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
I [auth SI]Ribosomal_S9e7ug7SI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth SJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
K [auth SK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
L [auth SL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
M [auth SM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
N [auth SN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
O [auth SO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
P [auth SP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
Q [auth SQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
R [auth SR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
S [auth SS]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
B [auth SB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
T [auth ST]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
U [auth SU]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
X [auth LA]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
Y [auth LB]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
Y [auth LB]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
Y [auth LB]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
Z [auth LC]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Z [auth LC]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
AA [auth LD]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
AA [auth LD]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth LE]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
BA [auth LE]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
BA [auth LE]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
CA [auth LF]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
CA [auth LF]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
C [auth SC]PF07650KH domain (KH_2)KH domain- Domain
C [auth SC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
DA [auth LI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
DA [auth LI]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
DA [auth LI]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
EA [auth LJ]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
EA [auth LJ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
FA [auth LK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
FA [auth LK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
GA [auth LM]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
HA [auth LN]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
IA [auth LO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
JA [auth LP]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
KA [auth LQ]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
MA [auth LS]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
D [auth SD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth SD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA [auth LT]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
OA [auth LU]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PA [auth LV]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
QA [auth LW]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
RA [auth LX]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
RA [auth LX]PF00467KOW motif (KOW)KOW motif- Family
SA [auth LY]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
E [auth SE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth SE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
DB [auth EF]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
DB [auth EF]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
DB [auth EF]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
DB [auth EF]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
DB [auth EF]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
F [auth SF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
H [auth SH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
I [auth SI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 16]16S rRNA---
J [auth SJ]30S ribosomal protein S10
K [auth SK]30S ribosomal protein S11
L [auth SL]30S ribosomal protein S12
M [auth SM]30S ribosomal protein S13
N [auth SN]30S ribosomal protein S14
O [auth SO]30S ribosomal protein S15
P [auth SP]30S ribosomal protein S16
Q [auth SQ]30S ribosomal protein S17
R [auth SR]30S ribosomal protein S18
S [auth SS]30S ribosomal protein S19
B [auth SB]30S ribosomal protein S2
T [auth ST]30S ribosomal protein S20
U [auth SU]30S ribosomal protein S21
V [auth 23]23S rRNA---
W [auth 5]5S rRNA---
X [auth LA]50S ribosomal protein L1
Y [auth LB]50S ribosomal protein L2
Z [auth LC]50S ribosomal protein L3
AA [auth LD]50S ribosomal protein L4
BA [auth LE]50S ribosomal protein L5
CA [auth LF]50S ribosomal protein L6
C [auth SC]30S ribosomal protein S3
DA [auth LI]50S ribosomal protein L9
EA [auth LJ]50S ribosomal protein L10
FA [auth LK]50S ribosomal protein L11
GA [auth LM]50S ribosomal protein L13
HA [auth LN]50S ribosomal protein L14
IA [auth LO]50S ribosomal protein L15
JA [auth LP]50S ribosomal protein L16
KA [auth LQ]50S ribosomal protein L17
LA [auth LR]50S ribosomal protein L18
MA [auth LS]50S ribosomal protein L19
D [auth SD]30S ribosomal protein S4
NA [auth LT]50S ribosomal protein L20
OA [auth LU]Ribosomal protein L21
PA [auth LV]50S ribosomal protein L22
QA [auth LW]50S ribosomal protein L23
RA [auth LX]50S ribosomal protein L24
SA [auth LY]50S ribosomal protein L25
TA [auth La]50S ribosomal protein L27
UA [auth Lb]50S ribosomal protein L28
VA [auth Lc]50S ribosomal protein L29
WA [auth Ld]50S ribosomal protein L30
E [auth SE]30S ribosomal protein S5
XA [auth Le]50S ribosomal protein L31
YA [auth Lf]50S ribosomal protein L32
ZA [auth Lg]50S ribosomal protein L33
AB [auth Lh]50S ribosomal protein L34
BB [auth Li]50S ribosomal protein L35
CB [auth Lj]50S ribosomal protein L36
DB [auth EF]Elongation factor G
EB [auth Dt]tRNA-fMet---
FB [auth Pt]tRNA-Phe---
GB [auth mR]mRNA---
F [auth SF]30S ribosomal protein S6
HB [auth B]Argyrin B---
G [auth SG]30S ribosomal protein S7
H [auth SH]30S ribosomal protein S8
I [auth SI]30S ribosomal protein S9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth SJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth SJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth SJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
J [auth SJ]IPR001848Small ribosomal subunit protein uS10Family
K [auth SK]IPR001971Small ribosomal subunit protein uS11Family
K [auth SK]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
K [auth SK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth SK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth SL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
L [auth SL]IPR006032Small ribosomal subunit protein uS12Family
L [auth SL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth SM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth SM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth SM]IPR001892Small ribosomal subunit protein uS13Family
M [auth SM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth SM]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
N [auth SN]IPR001209Small ribosomal subunit protein uS14Family
N [auth SN]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth SN]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
O [auth SO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth SO]IPR000589Small ribosomal subunit protein uS15Family
O [auth SO]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
P [auth SP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth SP]IPR000307Small ribosomal subunit protein bS16Family
P [auth SP]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
Q [auth SQ]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth SQ]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth SQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth SQ]IPR000266Small ribosomal subunit protein uS17Family
R [auth SR]IPR001648Small ribosomal subunit protein bS18Family
R [auth SR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth SR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
S [auth SS]IPR002222Small ribosomal subunit protein uS19Family
S [auth SS]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
S [auth SS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth SS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
B [auth SB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth SB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth SB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth SB]IPR001865Small ribosomal subunit protein uS2Family
T [auth ST]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth ST]IPR002583Small ribosomal subunit protein bS20Family
U [auth SU]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
U [auth SU]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
U [auth SU]IPR001911Small ribosomal subunit protein bS21Family
X [auth LA]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
X [auth LA]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
X [auth LA]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
X [auth LA]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
X [auth LA]IPR002143Large ribosomal subunit protein uL1Family
X [auth LA]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
Y [auth LB]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Y [auth LB]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth LB]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth LB]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Y [auth LB]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
Y [auth LB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth LB]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Y [auth LB]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Y [auth LB]IPR002171Large ribosomal subunit protein uL2Family
Z [auth LC]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Z [auth LC]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
Z [auth LC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Z [auth LC]IPR000597Large ribosomal subunit protein uL3Family
AA [auth LD]IPR013005Large ribosomal subunit protein uL4-likeFamily
AA [auth LD]IPR002136Large ribosomal subunit protein uL4Family
AA [auth LD]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth LE]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
BA [auth LE]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
BA [auth LE]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
BA [auth LE]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
BA [auth LE]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
BA [auth LE]IPR002132Large ribosomal subunit protein uL5Family
CA [auth LF]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
CA [auth LF]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
CA [auth LF]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
CA [auth LF]IPR000702Large ribosomal subunit protein uL6-likeFamily
CA [auth LF]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
C [auth SC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth SC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth SC]IPR004087K Homology domainDomain
C [auth SC]IPR004044K Homology domain, type 2Domain
C [auth SC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth SC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth SC]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
C [auth SC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth LI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
DA [auth LI]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
DA [auth LI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
DA [auth LI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
DA [auth LI]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
DA [auth LI]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
DA [auth LI]IPR000244Large ribosomal subunit protein bL9Family
EA [auth LJ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
EA [auth LJ]IPR001790Large ribosomal subunit protein uL10Family
EA [auth LJ]IPR022973Large ribosomal subunit protein uL10, bacterialFamily
EA [auth LJ]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
EA [auth LJ]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
FA [auth LK]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
FA [auth LK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
FA [auth LK]IPR000911Ribosomal protein uL11Family
FA [auth LK]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
FA [auth LK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
FA [auth LK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
FA [auth LK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
GA [auth LM]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
GA [auth LM]IPR005822Large ribosomal subunit protein uL13Family
GA [auth LM]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
GA [auth LM]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
HA [auth LN]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
HA [auth LN]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
HA [auth LN]IPR000218Large ribosomal subunit protein uL14Family
HA [auth LN]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IA [auth LO]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
IA [auth LO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IA [auth LO]IPR030878Large ribosomal subunit protein uL15Family
IA [auth LO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IA [auth LO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JA [auth LP]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
JA [auth LP]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
JA [auth LP]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
JA [auth LP]IPR016180Large ribosomal subunit protein uL16 domainDomain
JA [auth LP]IPR047873Large ribosomal subunit protein uL16Family
KA [auth LQ]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
KA [auth LQ]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
KA [auth LQ]IPR000456Large ribosomal subunit protein bL17Family
LA [auth LR]IPR005484Large ribosomal subunit protein uL18Family
LA [auth LR]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
MA [auth LS]IPR001857Large ribosomal subunit protein bL19Family
MA [auth LS]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
MA [auth LS]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
MA [auth LS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth SD]IPR002942RNA-binding S4 domainDomain
D [auth SD]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
D [auth SD]IPR022801Small ribosomal subunit protein uS4Family
D [auth SD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth SD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth SD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
NA [auth LT]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
NA [auth LT]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
NA [auth LT]IPR005813Large ribosomal subunit protein bL20Family
OA [auth LU]IPR028909Large ribosomal subunit protein bL21-likeFamily
OA [auth LU]IPR001787Large ribosomal subunit protein bL21Family
OA [auth LU]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
OA [auth LU]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
PA [auth LV]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
PA [auth LV]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
PA [auth LV]IPR001063Large ribosomal subunit protein uL22Family
PA [auth LV]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
PA [auth LV]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
QA [auth LW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QA [auth LW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
QA [auth LW]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
QA [auth LW]IPR013025Large ribosomal subunit protein uL23-likeFamily
RA [auth LX]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth LX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth LX]IPR003256Large ribosomal subunit protein uL24Family
RA [auth LX]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
RA [auth LX]IPR005824KOWDomain
RA [auth LX]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
SA [auth LY]IPR020055Ribosomal protein bL25, short-formFamily
SA [auth LY]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
SA [auth LY]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
SA [auth LY]IPR050070Bacterial ribosomal protein bL25Family
SA [auth LY]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
TA [auth La]IPR001684Large ribosomal subunit protein bL27Family
TA [auth La]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
UA [auth Lb]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
UA [auth Lb]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
UA [auth Lb]IPR026569Large ribosomal subunit protein bL28Family
UA [auth Lb]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
VA [auth Lc]IPR050063Universal ribosomal protein uL29Family
VA [auth Lc]IPR001854Large ribosomal subunit protein uL29Family
VA [auth Lc]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
VA [auth Lc]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
WA [auth Ld]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
WA [auth Ld]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
WA [auth Ld]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
WA [auth Ld]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
E [auth SE]IPR000851Small ribosomal subunit protein uS5Family
E [auth SE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth SE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth SE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth SE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth SE]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
E [auth SE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
XA [auth Le]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
XA [auth Le]IPR027491Large ribosomal subunit protein bL31 type AFamily
XA [auth Le]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
XA [auth Le]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
YA [auth Lf]IPR002677Large ribosomal subunit protein bL32Family
YA [auth Lf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YA [auth Lf]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
ZA [auth Lg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZA [auth Lg]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
ZA [auth Lg]IPR001705Large ribosomal subunit protein bL33Family
ZA [auth Lg]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
AB [auth Lh]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
AB [auth Lh]IPR000271Large ribosomal subunit protein bL34Family
BB [auth Li]IPR021137Large ribosomal subunit protein bL35-likeFamily
BB [auth Li]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
BB [auth Li]IPR001706Large ribosomal subunit protein bL35Family
BB [auth Li]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CB [auth Lj]IPR000473Large ribosomal subunit protein bL36Family
CB [auth Lj]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
DB [auth EF]IPR005225Small GTP-binding domainDomain
DB [auth EF]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
DB [auth EF]IPR004540Translation elongation factor EFG/EF2Family
DB [auth EF]IPR000795Translational (tr)-type GTP-binding domainDomain
DB [auth EF]IPR000640Elongation factor EFG, domain V-likeDomain
DB [auth EF]IPR031157Tr-type G domain, conserved siteConserved Site
DB [auth EF]IPR009022Elongation factor G, domain IIIDomain
DB [auth EF]IPR035647EF-G domain III/V-likeHomologous Superfamily
DB [auth EF]IPR041095Elongation Factor G, domain IIDomain
DB [auth EF]IPR004161Translation elongation factor EFTu-like, domain 2Domain
DB [auth EF]IPR047872Elongation factor G, domain IVDomain
DB [auth EF]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DB [auth EF]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
DB [auth EF]IPR035649EFG, domain VDomain
DB [auth EF]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
DB [auth EF]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
F [auth SF]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth SF]IPR000529Small ribosomal subunit protein bS6Family
F [auth SF]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth SF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth SF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth SG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth SG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth SG]IPR000235Small ribosomal subunit protein uS7Family
G [auth SG]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
G [auth SG]IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth SH]IPR000630Small ribosomal subunit protein uS8Family
H [auth SH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth SH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
I [auth SI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth SI]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
I [auth SI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth SI]IPR000754Small ribosomal subunit protein uS9Family
I [auth SI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth 16]2MG Parent Component: G

A [auth 16]4OC Parent Component: C

A [auth 16]5MC Parent Component: C

A [auth 16]G7M Parent Component: G

A [auth 16]MA6 Parent Component: A

A [auth 16]PSU Parent Component: U

A [auth 16]UR3 Parent Component: U

L [auth SL]D2T Parent Component: ASP

V [auth 23]1MG Parent Component: G

V [auth 23]2MA Parent Component: A

V [auth 23]2MG Parent Component: G

V [auth 23]3TD Parent Component: U

V [auth 23]5MC Parent Component: C

V [auth 23]5MU Parent Component: U

V [auth 23]6MZ Parent Component: A

V [auth 23]G7M Parent Component: G

V [auth 23]H2U Parent Component: U

V [auth 23]OMC Parent Component: C

V [auth 23]OMG Parent Component: G

V [auth 23]OMU Parent Component: U

V [auth 23]PSU Parent Component: U

JA [auth LP]4D4 Parent Component: ARG

EB [auth Dt]4SU Parent Component: U

EB [auth Dt]G7M Parent Component: G

EB [auth Dt]H2U Parent Component: U

EB [auth Dt]OMC Parent Component: C

EB [auth Dt]PSU Parent Component: U

FB [auth Pt]3AU Parent Component: U

FB [auth Pt]4SU Parent Component: U

FB [auth Pt]G7M Parent Component: G

FB [auth Pt]H2U Parent Component: U

FB [auth Pt]MIA Parent Component: A

FB [auth Pt]PSU Parent Component: U

HB [auth B]0UO Parent Component: TRP

HB [auth B]BB9 Parent Component: CYS

RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815
HB [auth B]DAL RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541 , AA0111 , AA0191

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862
HB [auth B]DBB RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541 , AA0111 , AA0191 , AA0112

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , (2S,3S,2'R)-3-methyllanthionine MOD:00121
HB [auth B]DHA Parent Component: SER

RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541 , AA0111 , AA0191 , AA0112 , AA0181

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , (2S,3S,2'R)-3-methyllanthionine MOD:00121 , dehydroalanine (Ser) MOD:00189 , dehydroalanine (Cys) MOD:00793 , dehydroalanine (Tyr) MOD:00824 , dehydroalanine MOD:01168 , dehydroalanine (Sec) MOD:01954
HB [auth B]SAR Parent Component: GLY

RESIDAA0241 , AA0242 , AA0243 , AA0244 , AA0466 , AA0467 , AA0485 , AA0541 , AA0111 , AA0191 , AA0112 , AA0181 , AA0063

PSI-MOD :  glycine thiazole-4-carboxylic acid MOD:00246 , L-serine thiazole-4-carboxylic acid MOD:00247 , L-phenylalanine thiazole-4-carboxylic acid MOD:00248 , L-cysteine thiazole-4-carboxylic acid MOD:00249 , L-isoleucine thiazole-4-carboxylic acid MOD:01389 , L-valine thiazole-4-carboxylic acid MOD:01390 , L-threonine thiazoline-4-carboxylic acid MOD:01408 , L-glutamate thiazole-4-carboxylic acid MOD:01815 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , (2S,3S,2'R)-3-methyllanthionine MOD:00121 , dehydroalanine (Ser) MOD:00189 , dehydroalanine (Cys) MOD:00793 , dehydroalanine (Tyr) MOD:00824 , dehydroalanine MOD:01168 , dehydroalanine (Sec) MOD:01954 , N-methylglycine MOD:00072