7PXC

Substrate-engaged mycobacterial Proteasome-associated ATPase in complex with open-gate 20S CP - composite map (state A)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth 0]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
C [auth 2]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
D [auth 4]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
DA [auth X]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
E [auth 6]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
F [auth 8]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
FA [auth Z]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
IA [auth d]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
JA [auth f]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
O [auth I]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
Q [auth K]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
U [auth O]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
W [auth Q]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
Z [auth T]	SCOP2B Superfamily	Class II glutamine amidotransferases	8085569	3000131	SCOP2B (2022-06-29)
G [auth A]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
H [auth B]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
I [auth C]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
J [auth D]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
K [auth E]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
L [auth F]	SCOP2B Superfamily	HypC/PAN OB-fold domain-like	8091037	3000354	SCOP2B (2022-06-29)
AA [auth U]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
BA [auth V]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
CA [auth W]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
EA [auth Y]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
GA [auth a]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
HA [auth b]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
N [auth H]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
P [auth J]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
R [auth L]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
S [auth M]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
T [auth N]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
V [auth P]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
X [auth R]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)
Y [auth S]	SCOP2B Superfamily	Class II glutamine amidotransferases	8079171	3000131	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 0]	Proteasome	e7pxc01	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
C [auth 2]	Proteasome	e7pxc21	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
D [auth 4]	Proteasome	e7pxc41	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
DA [auth X]	Proteasome	e7pxcX1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
E [auth 6]	Proteasome	e7pxc61	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
F [auth 8]	Proteasome	e7pxc81	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
FA [auth Z]	Proteasome	e7pxcZ1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
IA [auth d]	Proteasome	e7pxcd1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
JA [auth f]	Proteasome	e7pxcf1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
O [auth I]	Proteasome	e7pxcI1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
Q [auth K]	Proteasome	e7pxcK1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
U [auth O]	Proteasome	e7pxcO1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
W [auth Q]	Proteasome	e7pxcQ1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
Z [auth T]	Proteasome	e7pxcT1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
G [auth A]	Prot_ATP_ID_OB_C	e7pxcA3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
G [auth A]	Prot_ATP_ID_OB_N	e7pxcA1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
G [auth A]	F_UNCLASSIFIED	e7pxcA4	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
G [auth A]	Sigma54_activat	e7pxcA2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
H [auth B]	Prot_ATP_ID_OB_C	e7pxcB4	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
H [auth B]	Prot_ATP_ID_OB_N	e7pxcB3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
H [auth B]	F_UNCLASSIFIED	e7pxcB1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
H [auth B]	Sigma54_activat	e7pxcB2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
I [auth C]	Prot_ATP_ID_OB_C	e7pxcC3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
I [auth C]	Prot_ATP_ID_OB_N	e7pxcC1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
I [auth C]	F_UNCLASSIFIED	e7pxcC2	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
I [auth C]	Sigma54_activat	e7pxcC4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
J [auth D]	Prot_ATP_ID_OB_C	e7pxcD1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
J [auth D]	Prot_ATP_ID_OB_N	e7pxcD4	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
J [auth D]	F_UNCLASSIFIED	e7pxcD3	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
J [auth D]	Sigma54_activat	e7pxcD2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
K [auth E]	Prot_ATP_ID_OB_C	e7pxcE4	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
K [auth E]	Prot_ATP_ID_OB_N	e7pxcE3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
K [auth E]	F_UNCLASSIFIED	e7pxcE2	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
K [auth E]	Sigma54_activat	e7pxcE1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
L [auth F]	Prot_ATP_ID_OB_C	e7pxcF4	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_C	ECOD (1.6)
L [auth F]	Prot_ATP_ID_OB_N	e7pxcF3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Prot_ATP_ID_OB_N	ECOD (1.6)
L [auth F]	F_UNCLASSIFIED	e7pxcF1	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth F]	Sigma54_activat	e7pxcF2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Sigma54_activat	ECOD (1.6)
AA [auth U]	Proteasome	e7pxcU1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
BA [auth V]	Proteasome	e7pxcV1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
CA [auth W]	Proteasome	e7pxcW1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
EA [auth Y]	Proteasome	e7pxcY1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
GA [auth a]	Proteasome	e7pxca1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
HA [auth b]	Proteasome	e7pxcb1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
N [auth H]	Proteasome	e7pxcH1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
P [auth J]	Proteasome	e7pxcJ1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
R [auth L]	Proteasome	e7pxcL1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
S [auth M]	Proteasome	e7pxcM1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
T [auth N]	Proteasome	e7pxcN1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
V [auth P]	Proteasome	e7pxcP1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
X [auth R]	Proteasome	e7pxcR1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)
Y [auth S]	Proteasome	e7pxcS1	A: a+b four layers	X: Ntn/PP2C	H: Ntn	T: Proteasome subunits	F: Proteasome	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	PF00227	Proteasome subunit (Proteasome)	Proteasome subunit	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF00227	Proteasome subunit (Proteasome)	Proteasome subunit	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...	The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF16450	Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C)	Proteasomal ATPase OB C-terminal domain	This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2]	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF17758	Proteasomal ATPase OB N-terminal domain (Prot_ATP_ID_OB_N)	Proteasomal ATPase OB N-terminal domain	This is N-terminal interdomain (ID), oligonucleotide binding (OB) domain of proteasomal ATPase [1-2].	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	PF00004	ATPase family associated with various cellular activities (AAA) (AAA)	ATPase family associated with various cellular activities (AAA)	AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2].	Domain
M [auth G]	PF05639	Pup-like protein (Pup)	Pup-like protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	Proteasome subunit alpha	peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity hydrolase activity catalytic activity endopeptidase activity threonine-type endopeptidase activity	catabolic process proteolysis involved in protein catabolic process proteolysis proteasomal protein catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process catabolic process proteolysis involved in protein catabolic process proteolysis proteasomal protein catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process response to host defenses biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host defenses response to defenses of other organism response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction response to host response to external biotic stimulus	protein-containing complex intracellular anatomical structure proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex cellular anatomical entity intracellular protein-containing complex cell periphery plasma membrane membrane external encapsulating structure protein-containing complex intracellular anatomical structure proteasome core complex, alpha-subunit complex catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex cellular anatomical entity intracellular protein-containing complex cell periphery plasma membrane membrane external encapsulating structure cell wall peptidoglycan-based cell wall cytoplasm
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	Proteasome-associated ATPase	protein binding binding modification-dependent protein binding protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding protein binding binding modification-dependent protein binding protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity ATP-dependent peptidase activity peptidase activity catalytic activity, acting on a protein identical protein binding	catabolic process proteolysis involved in protein catabolic process proteolysis proteasomal protein catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasomal ubiquitin-independent protein catabolic process cellular process catabolic process proteolysis involved in protein catabolic process proteolysis proteasomal protein catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasomal ubiquitin-independent protein catabolic process cellular process protein unfolding response to nitrosative stress response to stimulus response to stress cellular response to stimulus biological process involved in interspecies interaction between organisms cellular response to oxidative stress cellular response to chemical stress response to biotic stimulus biological process involved in symbiotic interaction cellular response to stress symbiont-mediated perturbation of host process response to host immune response symbiont defense to host-produced reactive oxygen species symbiont-mediated perturbation of host innate immune response response to host response to external biotic stimulus modulation of process of another organism symbiont-mediated perturbation of host defense response response to host defenses response to other organism symbiont-mediated perturbation of host immune response response to defenses of other organism response to external stimulus biological process involved in interaction with host response to oxidative stress cellular response to chemical stimulus response to chemical cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to nitric oxide response to nitric oxide cellular response to reactive nitrogen species symbiont-mediated perturbation of host defenses	cell periphery plasma membrane membrane cellular anatomical entity external encapsulating structure cell wall peptidoglycan-based cell wall proteasome accessory complex protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex cell periphery plasma membrane membrane cellular anatomical entity external encapsulating structure cell wall peptidoglycan-based cell wall proteasome accessory complex protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome-activating nucleotidase complex intracellular protein-containing complex
M [auth G]	Prokaryotic ubiquitin-like protein Pup	protein tag activity molecular tag activity molecular adaptor activity protein-containing complex binding binding proteasome binding	catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis metabolic process protein metabolic process macromolecule metabolic process peptidyl-lysine modification macromolecule modification protein pupylation catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis metabolic process protein metabolic process macromolecule metabolic process peptidyl-lysine modification macromolecule modification protein pupylation peptidyl-amino acid modification protein modification process post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal proteasomal protein catabolic process	-
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	Proteasome subunit beta	peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity hydrolase activity catalytic activity endopeptidase activity threonine-type endopeptidase activity protein binding binding enzyme binding zymogen binding	catabolic process proteolysis involved in protein catabolic process proteolysis proteasomal protein catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process catabolic process proteolysis involved in protein catabolic process proteolysis proteasomal protein catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process response to host defenses biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host defenses response to defenses of other organism response to external stimulus response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction response to host response to external biotic stimulus	extracellular region cellular anatomical entity cell periphery plasma membrane membrane protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex extracellular region cellular anatomical entity cell periphery plasma membrane membrane protein-containing complex intracellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex proteasome core complex intracellular protein-containing complex proteasome core complex, beta-subunit complex cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR022296	Proteasome, alpha subunit, bacterial	Family
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR050115	Proteasome subunit alpha	Family
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR023332	Proteasome alpha-type subunit	Family
A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], A [auth 0], C [auth 2], D [auth 4], DA [auth X], E [auth 6], F [auth 8], FA [auth Z], IA [auth d], JA [auth f], O [auth I], Q [auth K], U [auth O], W [auth Q], Z [auth T]	IPR001353	Proteasome, subunit alpha/beta	Family
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR041626	Proteasomal ATPase, N-terminal OB domain	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR003593	AAA+ ATPase domain	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR003959	ATPase, AAA-type, core	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR050168	AAA ATPase domain-containing protein	Family
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR032501	Proteasomal ATPase, second OB domain	Domain
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR022482	Proteasome ATPase	Family
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR003960	ATPase, AAA-type, conserved site	Conserved Site
B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], B [auth 1], G [auth A], H [auth B], I [auth C], J [auth D], K [auth E], L [auth F]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
M [auth G]	IPR008515	Prokaryotic ubiquitin-like protein Pup	Family
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR029055	Nucleophile aminohydrolases, N-terminal	Homologous Superfamily
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR023333	Proteasome B-type subunit	Family
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR022483	Proteasome subunit beta, actinobacteria	Family
AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], AA [auth U], BA [auth V], CA [auth W], EA [auth Y], GA [auth a], HA [auth b], N [auth H], P [auth J], R [auth L], S [auth M], T [auth N], V [auth P], X [auth R], Y [auth S]	IPR001353	Proteasome, subunit alpha/beta	Family