Structure of the PL6 family alginate lyase Pedsa0632 from Pseudopedobacter saltans


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGlyco_transf_41e7o7aB1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_transf_41ECOD (v294.2)
Azf-C3HC4e7o7aA1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: zf-C3HC4ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF14592Chondroitinase B (Chondroitinas_B)Chondroitinase B- Repeat

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006626Parallel beta-helix repeatRepeat
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR039513PL-6 familyFamily
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily