Annotations: 7D86

Crystal Structure of zebrafishPHF14-PZP

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	zf-HC5HC2H	e7d86A1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: zf-HC5HC2H	ECOD (v294.2)
A	VP4_haemagglut	e7d86A2	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: VP4_haemagglut	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13831	PHD-finger (PHD_2)	PHD-finger	-	Family
A	PF13832	PHD-zinc-finger like domain (zf-HC5HC2H_2)	PHD-zinc-finger like domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PHD finger protein 14	protein binding binding histone binding histone reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	cellular response to stimulus regulation of cellular process response to stimulus signaling negative regulation of signaling negative regulation of biological process regulation of signal transduction regulation of platelet-derived growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway negative regulation of cell communication cell communication regulation of platelet-derived growth factor receptor-alpha signaling pathway negative regulation of cellular process signal transduction cellular response to stimulus regulation of cellular process response to stimulus signaling negative regulation of signaling negative regulation of biological process regulation of signal transduction regulation of platelet-derived growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway negative regulation of cell communication cell communication regulation of platelet-derived growth factor receptor-alpha signaling pathway negative regulation of cellular process signal transduction enzyme-linked receptor protein signaling pathway negative regulation of platelet-derived growth factor receptor-alpha signaling pathway regulation of biological process regulation of signaling cell surface receptor signaling pathway platelet-derived growth factor receptor-alpha signaling pathway negative regulation of response to stimulus negative regulation of platelet-derived growth factor receptor signaling pathway platelet-derived growth factor receptor signaling pathway biological regulation negative regulation of signal transduction regulation of response to stimulus regulation of cell communication cellular process negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation multicellular organismal process regulation of developmental process mesenchymal cell proliferation involved in lung development respiratory tube development multicellular organism development mesenchymal cell proliferation anatomical structure development lung development respiratory system development negative regulation of mesenchymal cell proliferation regulation of multicellular organismal process system development developmental process tube development negative regulation of developmental process animal organ development regulation of mesenchymal cell proliferation negative regulation of mesenchymal cell proliferation involved in lung development negative regulation of multicellular organismal process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process negative regulation of RNA biosynthetic process negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process lung alveolus development	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001965	Zinc finger, PHD-type	Domain
A	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A	IPR050701	Histone Modification Regulator	Family
A	IPR019787	Zinc finger, PHD-finger	Domain
A	IPR011011	Zinc finger, FYVE/PHD-type	Homologous Superfamily
A	IPR019786	Zinc finger, PHD-type, conserved site	Conserved Site
A	IPR034732	Extended PHD (ePHD) domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7D86 | pdb_00007d86

Crystal Structure of zebrafishPHF14-PZP

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage