6G4R
Corynebacterium glutamicum OxyR C206S mutant, H2O2-bound
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | HTH_1 | e6g4rB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
A [auth B] | LysR_substrate_1 | e6g4rB2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_1 | ECOD (1.6) |
D [auth G] | HTH_1 | e6g4rG1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
D [auth G] | LysR_substrate_1 | e6g4rG2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_1 | ECOD (1.6) |
B [auth A] | HTH_1 | e6g4rA2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
B [auth A] | LysR_substrate_1 | e6g4rA1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_1 | ECOD (1.6) |
C [auth E] | HTH_1 | e6g4rE1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: HTH_1 | ECOD (1.6) |
C [auth E] | LysR_substrate_1 | e6g4rE2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B] | PF03466 | LysR substrate binding domain (LysR_substrate) | LysR substrate binding domain | - | Family |
A [auth B] | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1) | Bacterial regulatory helix-turn-helix protein, lysR family | - | Domain |
B [auth A], D [auth G] | PF03466 | LysR substrate binding domain (LysR_substrate) | LysR substrate binding domain | - | Family |
B [auth A], D [auth G] | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1) | Bacterial regulatory helix-turn-helix protein, lysR family | - | Domain |
C [auth E] | PF03466 | LysR substrate binding domain (LysR_substrate) | LysR substrate binding domain | - | Family |
C [auth E] | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1) | Bacterial regulatory helix-turn-helix protein, lysR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B] | Hydrogen peroxide-inducible genes activator | - | ||
B [auth A], D [auth G] | Hydrogen peroxide-inducible genes activator | - | ||
C [auth E] | Hydrogen peroxide-inducible genes activator | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B] | IPR005119 | LysR, substrate-binding | Domain |
A [auth B] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth B] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A [auth B] | IPR000847 | Transcription regulator HTH, LysR | Domain |
B [auth A], D [auth G] | IPR005119 | LysR, substrate-binding | Domain |
B [auth A], D [auth G] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
B [auth A], D [auth G] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
B [auth A], D [auth G] | IPR000847 | Transcription regulator HTH, LysR | Domain |
C [auth E] | IPR005119 | LysR, substrate-binding | Domain |
C [auth E] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
C [auth E] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
C [auth E] | IPR000847 | Transcription regulator HTH, LysR | Domain |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
A [auth B] | CSO | Parent Component: CYS :  AA0205 :  L-cysteine sulfenic acid MOD:00210 |
A [auth B] | OCS | Parent Component: CYS :  AA0205 , AA0556 :  L-cysteine sulfenic acid MOD:00210 , L-cysteic acid (L-cysteine sulfonic acid) MOD:00460 |
B [auth A], D [auth G] | CSD | Parent Component: CYS :  AA0205 , AA0556 , AA0262 :  L-cysteine sulfenic acid MOD:00210 , L-cysteic acid (L-cysteine sulfonic acid) MOD:00460 , L-cysteine sulfinic acid MOD:00267 |
C [auth E] | CSD | Parent Component: CYS :  AA0205 , AA0556 , AA0262 , AA0262 :  L-cysteine sulfenic acid MOD:00210 , L-cysteic acid (L-cysteine sulfonic acid) MOD:00460 , L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfinic acid MOD:00267 |