Annotations: 6G4R

Corynebacterium glutamicum OxyR C206S mutant, H2O2-bound

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth E]	Transpeptidase	e6g4rE1	A: beta barrels	X: N-cbl like	H: a+b domain in beta-lactamase/transpeptidase-like proteins	T: a+b domain in beta-lactamase/transpeptidase-like proteins	F: Transpeptidase	ECOD (v294.2)
B [auth A]	Transpeptidase	e6g4rA1	A: beta barrels	X: N-cbl like	H: a+b domain in beta-lactamase/transpeptidase-like proteins	T: a+b domain in beta-lactamase/transpeptidase-like proteins	F: Transpeptidase	ECOD (v294.2)
D [auth G]	Transpeptidase	e6g4rG1	A: beta barrels	X: N-cbl like	H: a+b domain in beta-lactamase/transpeptidase-like proteins	T: a+b domain in beta-lactamase/transpeptidase-like proteins	F: Transpeptidase	ECOD (v294.2)
A [auth B]	Transpeptidase	e6g4rB1	A: beta barrels	X: N-cbl like	H: a+b domain in beta-lactamase/transpeptidase-like proteins	T: a+b domain in beta-lactamase/transpeptidase-like proteins	F: Transpeptidase	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth E]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
C [auth E]	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (utative)
B [auth A]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
B [auth A]	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (utative)
D [auth G]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
D [auth G]	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (utative)
A [auth B]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
A [auth B]	3.40.190.10	Alpha Beta	3-Layer(aba) Sandwich	D-Maltodextrin-Binding Protein	domain 2	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth E]	PF03466	LysR substrate binding domain (LysR_substrate)	LysR substrate binding domain	-	Family
C [auth E]	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1)	Bacterial regulatory helix-turn-helix protein, lysR family		Domain
B [auth A], D [auth G]	PF03466	LysR substrate binding domain (LysR_substrate)	LysR substrate binding domain	-	Family
B [auth A], D [auth G]	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1)	Bacterial regulatory helix-turn-helix protein, lysR family		Domain
A [auth B]	PF03466	LysR substrate binding domain (LysR_substrate)	LysR substrate binding domain	-	Family
A [auth B]	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1)	Bacterial regulatory helix-turn-helix protein, lysR family		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth E]	Hydrogen peroxide-inducible genes activator	DNA binding binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	-	protein-containing complex protein-DNA complex
B [auth A], D [auth G]	Hydrogen peroxide-inducible genes activator	DNA binding binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	-	protein-containing complex protein-DNA complex
A [auth B]	Hydrogen peroxide-inducible genes activator	DNA binding binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	-	protein-containing complex protein-DNA complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth E]	IPR005119	LysR, substrate-binding	Domain
C [auth E]	IPR000847	LysR, HTH, N-terminal domain	Domain
C [auth E]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
C [auth E]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
B [auth A], D [auth G]	IPR005119	LysR, substrate-binding	Domain
B [auth A], D [auth G]	IPR000847	LysR, HTH, N-terminal domain	Domain
B [auth A], D [auth G]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
B [auth A], D [auth G]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A [auth B]	IPR005119	LysR, substrate-binding	Domain
A [auth B]	IPR000847	LysR, HTH, N-terminal domain	Domain
A [auth B]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A [auth B]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
C [auth E]	CSD	Parent Component: CYS : AA0262 : L-cysteine sulfinic acid MOD:00267
B [auth A], D [auth G]	CSD	Parent Component: CYS : AA0262 , AA0262 : L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfinic acid MOD:00267
A [auth B]	CSO	Parent Component: CYS : AA0262 , AA0262 , AA0205 : L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfenic acid MOD:00210
A [auth B]	OCS	Parent Component: CYS : AA0262 , AA0262 , AA0205 , AA0556 : L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfenic acid MOD:00210 , L-cysteic acid (L-cysteine sulfonic acid) MOD:00460

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.