6YWI
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148E variant
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6ywia1 | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | (Chloroflexus aggregans DSM 9485 ) [TaxId: 326427 ], | SCOPe (2.08) |
A | d6ywia2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Chloroflexus aggregans DSM 9485 ) [TaxId: 326427 ], | SCOPe (2.08) |
B | d6ywib_ | Alpha and beta proteins (a+b) | Profilin-like | PYP-like sensor domain (PAS domain) | automated matches | automated matches | (Chloroflexus aggregans DSM 9485 ) [TaxId: 326427 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13426 | e6ywiA1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF13426 | ECOD (1.6) |
B | PF13426 | e6ywiB1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF13426 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13426 | PAS domain (PAS_9) | PAS domain | This domain is found in many signalling proteins in which it functions as a sensor domain. It recognises FMN, Zn(II), FAD and riboflavin (MAtilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000014 | PAS domain | Domain | |
IPR011006 | CheY-like superfamily | Homologous Superfamily | |
IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | Domain | |
IPR001789 | Signal transduction response regulator, receiver domain | Domain | |
IPR013656 | PAS fold-4 | Domain | |
IPR036097 | Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily | Homologous Superfamily | |
IPR036890 | Histidine kinase/HSP90-like ATPase superfamily | Homologous Superfamily | |
IPR003661 | Signal transduction histidine kinase, dimerisation/phosphoacceptor domain | Domain | |
IPR035965 | PAS domain superfamily | Homologous Superfamily | |
IPR001610 | PAC motif | Repeat | |
IPR003594 | Histidine kinase/HSP90-like ATPase domain | Domain | |
IPR000700 | PAS-associated, C-terminal | Domain | |
IPR013655 | PAS fold-3 | Domain | |
IPR005467 | Histidine kinase domain | Domain | |
IPR036641 | HPT domain superfamily | Homologous Superfamily | |
IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | Domain |