6WJJ
Anthrax octamer prechannel bound to full-length lethal factor
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
J [auth E] | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
J [auth E] | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
J [auth E] | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
K [auth H] | SCOP2B Superfamily | FIP-like | 8054214 | 3002056 | SCOP2B (2022-06-29) |
K [auth H] | SCOP2B Superfamily | GLEYA/PA14-like | 8054210 | 3002282 | SCOP2B (2022-06-29) |
K [auth H] | SCOP2B Superfamily | Anthrax PA domain 3-like | 8054212 | 3000301 | SCOP2B (2022-06-29) |
C [auth L] | SCOP2B Superfamily | ADP-ribosylation | 8036792 | 3001208 | SCOP2B (2022-06-29) |
C [auth L] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036791 | 3001975 | SCOP2B (2022-06-29) |
C [auth L] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036789 | 3001975 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | ADP-ribosylation | 8036792 | 3001208 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036789 | 3001975 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036791 | 3001975 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036789 | 3001975 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036791 | 3001975 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | ADP-ribosylation | 8036792 | 3001208 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036791 | 3001975 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8036789 | 3001975 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | ADP-ribosylation | 8036792 | 3001208 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Binary_toxB_2 | e6wjjA2 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
A | EUF07840 | e6wjjA1 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
A | Binary_toxB_3 | e6wjjA4 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
A | Binary_toxB | e6wjjA3 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
D [auth C] | Binary_toxB_2 | e6wjjC2 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
D [auth C] | EUF07840 | e6wjjC3 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
D [auth C] | Binary_toxB_3 | e6wjjC1 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
D [auth C] | Binary_toxB | e6wjjC4 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
G [auth D] | Binary_toxB_2 | e6wjjD3 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
G [auth D] | EUF07840 | e6wjjD4 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
G [auth D] | Binary_toxB_3 | e6wjjD1 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
G [auth D] | Binary_toxB | e6wjjD2 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
J [auth E] | Binary_toxB_2 | e6wjjE3 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
J [auth E] | EUF07840 | e6wjjE4 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
J [auth E] | Binary_toxB_3 | e6wjjE1 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
J [auth E] | Binary_toxB | e6wjjE2 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
B | Binary_toxB_2 | e6wjjB3 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
B | EUF07840 | e6wjjB4 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
B | Binary_toxB_3 | e6wjjB2 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
B | Binary_toxB | e6wjjB1 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
E [auth F] | Binary_toxB_2 | e6wjjF1 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
E [auth F] | EUF07840 | e6wjjF4 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
E [auth F] | Binary_toxB_3 | e6wjjF2 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
E [auth F] | Binary_toxB | e6wjjF3 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
H [auth G] | Binary_toxB_2 | e6wjjG3 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
H [auth G] | EUF07840 | e6wjjG4 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
H [auth G] | Binary_toxB_3 | e6wjjG1 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
H [auth G] | Binary_toxB | e6wjjG2 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
K [auth H] | Binary_toxB_2 | e6wjjH4 | A: beta sandwiches | X: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | H: Middle beta-sandwich domain in anthrax protective antigen (From Topology) | T: Middle beta-sandwich domain in anthrax protective antigen | F: Binary_toxB_2 | ECOD (1.6) |
K [auth H] | EUF07840 | e6wjjH1 | A: beta sandwiches | X: Ig-like domain in anthrax protective antigen (From Topology) | H: Ig-like domain in anthrax protective antigen (From Topology) | T: Ig-like domain in anthrax protective antigen | F: EUF07840 | ECOD (1.6) |
K [auth H] | Binary_toxB_3 | e6wjjH3 | A: a+b two layers | X: beta-grasp domain in anthrax protective antigen (From Topology) | H: beta-grasp domain in anthrax protective antigen (From Topology) | T: beta-grasp domain in anthrax protective antigen | F: Binary_toxB_3 | ECOD (1.6) |
K [auth H] | Binary_toxB | e6wjjH2 | A: few secondary structure elements | X: Ca-binding domain in anthrax protective antigen (From Topology) | H: Ca-binding domain in anthrax protective antigen (From Topology) | T: Ca-binding domain in anthrax protective antigen | F: Binary_toxB | ECOD (1.6) |
C [auth L] | Anthrax-tox_M | e6wjjL3 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: Anthrax-tox_M | ECOD (1.6) |
C [auth L] | ATLF | e6wjjL2 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: ATLF | ECOD (1.6) |
F [auth I] | Anthrax-tox_M | e6wjjI2 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: Anthrax-tox_M | ECOD (1.6) |
F [auth I] | ATLF | e6wjjI1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: ATLF | ECOD (1.6) |
I [auth J] | Anthrax-tox_M | e6wjjJ3 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: Anthrax-tox_M | ECOD (1.6) |
I [auth J] | ATLF | e6wjjJ1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: ATLF | ECOD (1.6) |
L [auth K] | Anthrax-tox_M | e6wjjK1 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: Anthrax-tox_M | ECOD (1.6) |
L [auth K] | ATLF | e6wjjK3 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: ATLF | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth C], G [auth D], J [auth E] | PF17475 | Clostridial binary toxin B/anthrax toxin PA domain 2 (Binary_toxB_2) | Clostridial binary toxin B/anthrax toxin PA domain 2 | This domain forms the middle beta sandwish domain in anthrax toxin. | Domain |
A, D [auth C], G [auth D], J [auth E] | PF17476 | Clostridial binary toxin B/anthrax toxin PA domain 3 (Binary_toxB_3) | Clostridial binary toxin B/anthrax toxin PA domain 3 | This entry represents the beta-grasp domain in anthrax protective antigen. | Domain |
A, D [auth C], G [auth D], J [auth E] | PF03495 | Clostridial binary toxin B/anthrax toxin PA Ca-binding domain (Binary_toxB) | Clostridial binary toxin B/anthrax toxin PA Ca-binding domain | This domain is a calcium binding domain in the anthrax toxin protective antigen. | Domain |
A, D [auth C], G [auth D], J [auth E] | PF20835 | Anthrax protective antigen, immunoglobulin-like domain (PA_Ig-like) | Anthrax protective antigen, immunoglobulin-like domain | Anthrax protective antigen (PA) is one of the three proteins forming the anthrax toxin. It is involved in the first step of toxin entry into host cells, enabling lethal factor (LF) and oedema factor (EF) to cross to the cytosol. PA undergoes cleavage ... | Domain |
B, E [auth F], H [auth G], K [auth H] | PF17475 | Clostridial binary toxin B/anthrax toxin PA domain 2 (Binary_toxB_2) | Clostridial binary toxin B/anthrax toxin PA domain 2 | This domain forms the middle beta sandwish domain in anthrax toxin. | Domain |
B, E [auth F], H [auth G], K [auth H] | PF17476 | Clostridial binary toxin B/anthrax toxin PA domain 3 (Binary_toxB_3) | Clostridial binary toxin B/anthrax toxin PA domain 3 | This entry represents the beta-grasp domain in anthrax protective antigen. | Domain |
B, E [auth F], H [auth G], K [auth H] | PF03495 | Clostridial binary toxin B/anthrax toxin PA Ca-binding domain (Binary_toxB) | Clostridial binary toxin B/anthrax toxin PA Ca-binding domain | This domain is a calcium binding domain in the anthrax toxin protective antigen. | Domain |
B, E [auth F], H [auth G], K [auth H] | PF20835 | Anthrax protective antigen, immunoglobulin-like domain (PA_Ig-like) | Anthrax protective antigen, immunoglobulin-like domain | Anthrax protective antigen (PA) is one of the three proteins forming the anthrax toxin. It is involved in the first step of toxin entry into host cells, enabling lethal factor (LF) and oedema factor (EF) to cross to the cytosol. PA undergoes cleavage ... | Domain |
C [auth L], F [auth I], I [auth J], L [auth K] | PF09156 | Anthrax toxin lethal factor, middle domain (Anthrax-tox_M) | Anthrax toxin lethal factor, middle domain | Members of this family, which are predominantly found in anthrax toxin lethal factor, adopt a structure consisting of a core of antiparallel beta sheets and alpha helices. They form a long deep groove within the protein that anchors the 16-residue N- ... | Domain |
C [auth L], F [auth I], I [auth J], L [auth K] | PF07737 | Anthrax toxin lethal factor, N- and C-terminal domain (ATLF) | Anthrax toxin lethal factor, N- and C-terminal domain | The C-terminal domain is the catalytically active domain whereas the N-terminal domain is likely to be inactive. | Domain |