6WFQ
NanR dimer-DNA hetero-complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF00392 | e6wfqC2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00392 | ECOD (1.6) |
A [auth C] | PF07729 | e6wfqC1 | A: alpha bundles | X: Fatty acid responsive transcription factor FadR, C-terminal domain (From Topology) | H: Fatty acid responsive transcription factor FadR, C-terminal domain (From Topology) | T: Fatty acid responsive transcription factor FadR, C-terminal domain | F: PF07729 | ECOD (1.6) |
B [auth D] | PF00392 | e6wfqD2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00392 | ECOD (1.6) |
B [auth D] | PF07729 | e6wfqD1 | A: alpha bundles | X: Fatty acid responsive transcription factor FadR, C-terminal domain (From Topology) | H: Fatty acid responsive transcription factor FadR, C-terminal domain (From Topology) | T: Fatty acid responsive transcription factor FadR, C-terminal domain | F: PF07729 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth D] | PF07729 | FCD domain (FCD) | FCD domain | This domain is the C-terminal ligand binding domain of many members of the GntR family. This domain binds to a range of effector molecules, including Lactate, Zn(II), Ni(II), Ca(II), Mg(II), citrate, sugar acids, sialic acid and N-acetylglucosamine-6 ... | Domain |
A [auth C], B [auth D] | PF00392 | Bacterial regulatory proteins, gntR family (GntR) | Bacterial regulatory proteins, gntR family | This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins include the following sub-fam ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth D] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth C], B [auth D] | IPR008920 | Transcription regulator FadR/GntR, C-terminal | Homologous Superfamily |
A [auth C], B [auth D] | IPR000524 | Transcription regulator HTH, GntR | Domain |
A [auth C], B [auth D] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A [auth C], B [auth D] | IPR011711 | GntR, C-terminal | Domain |
A [auth C], B [auth D] | IPR023730 | HTH-type transcriptional repressor NanR | Family |