6QUG | pdb_00006qug

GHK tagged MBP-Nup98(1-29)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
L	d6qugl1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
L	d6qugl2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
K	d6qugk1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
K	d6qugk2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
J	d6qugj1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
J	d6qugj2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
I	d6qugi1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
I	d6qugi2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
H	d6qugh1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
H	d6qugh2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
G	d6qugg1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
G	d6qugg2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
F	d6qugf1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
F	d6qugf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
E	d6quge1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
E	d6quge2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
D	d6qugd1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
D	d6qugd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
C	d6qugc1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
C	d6qugc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
B	d6qugb1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
B	d6qugb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
A	d6quga1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Phosphate binding protein-like	automated matches	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)
A	d6quga2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Escherichia coli ) [TaxId: 562 ], (Tetrahymena thermophila SB210 ) [TaxId: 312017 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type 2 solute binding protein-like	8058187	3000083	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	RE_SinI	e6qugL1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
K	RE_SinI	e6qugK1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
J	RE_SinI	e6qugJ1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
I	RE_SinI	e6qugI1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
H	RE_SinI	e6qugH1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
G	RE_SinI	e6qugG1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
F	RE_SinI	e6qugF1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
E	RE_SinI	e6qugE1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
D	RE_SinI	e6qugD1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
C	RE_SinI	e6qugC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
B	RE_SinI	e6qugB1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)
A	RE_SinI	e6qugA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: RE_SinI	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF01547	Bacterial extracellular solute-binding protein (SBP_bac_1)	Bacterial extracellular solute-binding protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Maltodextrin-binding protein,Nucleoporin, putative	RNA binding binding nucleic acid binding structural molecule activity structural constituent of nuclear pore transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding disaccharide binding carbohydrate binding maltose binding	localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization macromolecule localization RNA localization localization telomere localization telomere tethering at nuclear periphery chromosome localization organelle localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport cellular component organization organelle organization chromosome organization cellular process cellular component organization or biogenesis transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery establishment of protein localization cellular localization nucleocytoplasmic transport nuclear transport intracellular transport protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA export from nucleus nuclear export cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cell chemotaxis chemotaxis response to external stimulus cellular response to chemical stimulus taxis response to chemical cell migration cell motility locomotion carbohydrate transport oligosaccharide transport disaccharide transport maltose transport polysaccharide localization dextrin transport maltodextrin transmembrane transport polysaccharide transport response to disaccharide response to oxygen-containing compound detection of maltose stimulus detection of stimulus response to carbohydrate detection of chemical stimulus detection of disaccharide stimulus response to maltose detection of carbohydrate stimulus	membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system nuclear pore cytoplasmic filaments intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex intracellular membrane-bounded organelle endomembrane system nuclear pore cytoplasmic filaments intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope nuclear pore ATPase dependent transmembrane transport complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery transmembrane transporter complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing extracellular region periplasmic space outer membrane-bounded periplasmic space cell envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR025574	Nucleoporin FG repeat	Repeat
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR037665	Nucleoporin peptidase S59-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036903	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR007230	Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR006061	Solute-binding family 1, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR006060	Maltose/Cyclodextrin ABC transporter, substrate-binding protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR006059	Bacterial-type extracellular solute-binding protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.