Crystal structure of the site-specific DNA nickase N.BspD6I E418A Mutant
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053985 | 3000034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053984 | 3000034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Restriction endonuclease-like | 8053982 | 3000104 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053985 | 3000034 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Restriction endonuclease-like | 8053982 | 3000104 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053984 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | YscJ_FliF | e6qnzB1 | A: beta barrels | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Family A G protein-coupled receptor-like | F: YscJ_FliF | ECOD (v294.2) |
| A | CoV_S2 | e6qnzA1 | A: beta barrels | X: Family A G protein-coupled receptor-like | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: CoV_S2 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.20.1270.310 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (utative) |
| B | 3.40.91.50 | Alpha Beta | 3-Layer(aba) Sandwich | Restriction Endonuclease | CATH (utative) | |
| A | 1.20.1270.310 | Mainly Alpha | Up-down Bundle | Substrate Binding Domain Of Dnak | Chain:A | CATH (utative) |
| A | 3.40.91.50 | Alpha Beta | 3-Layer(aba) Sandwich | Restriction Endonuclease | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Heterodimeric restriction endonuclease R.BspD6I large subunit | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR018573 | Restriction endonuclease, type II, AlwI | Family |
