6L7I

Signal substraction of TcdB1-TccC2 and part of TcdA1


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FPF03534,PF12255,PF12256e6l7iF2 A: beta meandersX: Rearrangement hotspot (RHS) repeats protein (From Topology)H: Rearrangement hotspot (RHS) repeats protein (From Topology)T: Rearrangement hotspot (RHS) repeats proteinF: PF03534,PF12255,PF12256ECOD (1.6)
FF_UNCLASSIFIEDe6l7iF1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: Propeller domain in ABC toxin B componentF: F_UNCLASSIFIEDECOD (1.6)
GPF18807e6l7iG1 A: beta meandersX: Rearrangement hotspot (RHS) repeats protein (From Topology)H: Rearrangement hotspot (RHS) repeats protein (From Topology)T: Rearrangement hotspot (RHS) repeats proteinF: PF18807ECOD (1.6)
APF18276e6l7iA1 A: beta sandwichesX: jelly-rollH: Galactose-binding domain-like (From Topology)T: Galactose-binding domain-likeF: PF18276ECOD (1.6)
BPF18276e6l7iB1 A: beta sandwichesX: jelly-rollH: Galactose-binding domain-like (From Topology)T: Galactose-binding domain-likeF: PF18276ECOD (1.6)
CPF18276e6l7iC1 A: beta sandwichesX: jelly-rollH: Galactose-binding domain-like (From Topology)T: Galactose-binding domain-likeF: PF18276ECOD (1.6)
DPF18276e6l7iD1 A: beta sandwichesX: jelly-rollH: Galactose-binding domain-like (From Topology)T: Galactose-binding domain-likeF: PF18276ECOD (1.6)
EPF18276e6l7iE1 A: beta sandwichesX: jelly-rollH: Galactose-binding domain-like (From Topology)T: Galactose-binding domain-likeF: PF18276ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF12256Insecticide toxin TcdB middle/N-terminal region (TcdB_toxin_midN)Insecticide toxin TcdB middle/N-terminal region- Repeat
PF12255Insecticide toxin TcdB middle/C-terminal region (TcdB_toxin_midC)Insecticide toxin TcdB middle/C-terminal region- Family
PF03534Salmonella virulence plasmid 65kDa B protein (SpvB)Salmonella virulence plasmid 65kDa B protein- Family
PF18807Tripartite Tc toxins repeat (TTc_toxin_rep)Tripartite Tc toxins repeat- Family
A, B, C, D, E
PF18276Tc toxin complex TcA C-terminal TcB-binding domain (TcA_TcB_BD)Tc toxin complex TcA C-terminal TcB-binding domainThis domain is found in the C-terminal region of the Tc toxin TcA, present in Photorhabdus luminescens. Tc Toxin complexes bind to the cell surface, are endocytosed and perforate the host endosomal membrane by forming channels that translocate toxic ...This domain is found in the C-terminal region of the Tc toxin TcA, present in Photorhabdus luminescens. Tc Toxin complexes bind to the cell surface, are endocytosed and perforate the host endosomal membrane by forming channels that translocate toxic enzymes into the host. This domain is responsible for binding to toxin TcB. Binding of TcA to TcB/TcC opens the beta-propeller gate [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
TcdB1- -
TccC2- - -
TccC2- - -
A, B, C, D, E
TcdA1 - -