6L7I
Signal substraction of TcdB1-TccC2 and part of TcdA1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F | PF03534,PF12255,PF12256 | e6l7iF2 | A: beta meanders | X: Rearrangement hotspot (RHS) repeats protein (From Topology) | H: Rearrangement hotspot (RHS) repeats protein (From Topology) | T: Rearrangement hotspot (RHS) repeats protein | F: PF03534,PF12255,PF12256 | ECOD (1.6) |
F | F_UNCLASSIFIED | e6l7iF1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: Propeller domain in ABC toxin B component | F: F_UNCLASSIFIED | ECOD (1.6) |
G | PF18807 | e6l7iG1 | A: beta meanders | X: Rearrangement hotspot (RHS) repeats protein (From Topology) | H: Rearrangement hotspot (RHS) repeats protein (From Topology) | T: Rearrangement hotspot (RHS) repeats protein | F: PF18807 | ECOD (1.6) |
A | PF18276 | e6l7iA1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF18276 | ECOD (1.6) |
B | PF18276 | e6l7iB1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF18276 | ECOD (1.6) |
C | PF18276 | e6l7iC1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF18276 | ECOD (1.6) |
D | PF18276 | e6l7iD1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF18276 | ECOD (1.6) |
E | PF18276 | e6l7iE1 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF18276 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12256 | Insecticide toxin TcdB middle/N-terminal region (TcdB_toxin_midN) | Insecticide toxin TcdB middle/N-terminal region | - | Repeat | |
PF12255 | Insecticide toxin TcdB middle/C-terminal region (TcdB_toxin_midC) | Insecticide toxin TcdB middle/C-terminal region | - | Family | |
PF03534 | Salmonella virulence plasmid 65kDa B protein (SpvB) | Salmonella virulence plasmid 65kDa B protein | - | Family | |
PF18807 | Tripartite Tc toxins repeat (TTc_toxin_rep) | Tripartite Tc toxins repeat | - | Family | |
PF18276 | Tc toxin complex TcA C-terminal TcB-binding domain (TcA_TcB_BD) | Tc toxin complex TcA C-terminal TcB-binding domain | This domain is found in the C-terminal region of the Tc toxin TcA, present in Photorhabdus luminescens. Tc Toxin complexes bind to the cell surface, are endocytosed and perforate the host endosomal membrane by forming channels that translocate toxic ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
TcdB1 | - | - | ||
TccC2 | - | - | - | |
TccC2 | - | - | - | |
TcdA1 | - | - |