6L33
Crystal structure of the regulatory domain of MexT, a transcriptional activator in Pseudomonas aeruginosa
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6l33a_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
B | d6l33b1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
B | d6l33b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
C | d6l33c_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
D | d6l33d_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8100526 | 3000083 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Phosphate binding protein-like | 8100525 | 4000229 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Type 2 solute binding protein-like | 8100526 | 3000083 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Type 2 solute binding protein-like | 8100526 | 3000083 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8100526 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LysR_substrate_2 | e6l33A1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
A | UNK_F_TYPE | e6l33A2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
B | LysR_substrate_2 | e6l33B2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
B | UNK_F_TYPE | e6l33B1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
C | LysR_substrate_2 | e6l33C2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
C | UNK_F_TYPE | e6l33C1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
D | LysR_substrate_2 | e6l33D2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: LysR_substrate_2 | ECOD (1.6) |
D | UNK_F_TYPE | e6l33D1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: UNK_F_TYPE | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005119 | LysR, substrate-binding | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR050389 | LysR-type Transcriptional Regulators | Family | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR000847 | Transcription regulator HTH, LysR | Domain |