6I9R

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
O [auth F]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
S [auth K]SCOP2B SuperfamilyRibosomal protein L13 8100460 3001134 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
T [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
W [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]KOG4080e6i9r01 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: KOG4080ECOD (1.6)
J [auth 9]MRP-L27e6i9r91 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
M [auth D]Ribosomal_L2e6i9rD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
M [auth D]Ribosomal_L2_Ce6i9rD2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
N [auth E]Ribosomal_L3e6i9rE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
O [auth F]Ribosomal_L4e6i9rF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
P [auth H]Ribosomal_L9_N_1e6i9rH1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
Q [auth I]Ribosomal_L10e6i9rI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
R [auth J]Ribosomal_L11e6i9rJ2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
R [auth J]Ribosomal_L11_Ne6i9rJ1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
S [auth K]Ribosomal_L13e6i9rK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
B [auth 1]Ribosomal_L33e6i9r11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
T [auth L]Ribosomal_L14e6i9rL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
U [auth M]Ribosomal_L27Ae6i9rM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
V [auth N]Ribosomal_L16e6i9rN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
W [auth O]Ribosomal_L17e6i9rO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
X [auth P]Ribosomal_L18pe6i9rP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
Y [auth Q]Ribosomal_L19e6i9rQ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
Z [auth R]Ribosomal_L20e6i9rR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
AA [auth S]Ribosomal_L21pe6i9rS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
BA [auth T]Ribosomal_L22e6i9rT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
CA [auth U]Ribosomal_L23_2e6i9rU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
C [auth 2]Ribosomal_L34e6i9r21 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DA [auth V]ribosomal_L24_1e6i9rV1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
EA [auth W]Ribosomal_L27e6i9rW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
FA [auth X]Ribosomal_L28_1e6i9rX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28_1ECOD (1.6)
GA [auth Y]MRP-L47e6i9rY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
HA [auth Z]Ribosomal_L30e6i9rZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
IA [auth a]MRP-S32e6i9ra1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
JA [auth b]L51_S25_CI-B8e6i9rb1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
KA [auth c]Ribonucleas_3_3e6i9rc1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
KA [auth c]dsrme6i9rc2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
LA [auth d]Tim44e6i9rd1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)
MA [auth e]MRP-L46e6i9re1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
D [auth 3]Ribosomal_L35pe6i9r31 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
NA [auth f]Ribosomal_S10_2e6i9rf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
OA [auth g]Img2e6i9rg1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
PA [auth h]Ribosomal_L50e6i9rh1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
QA [auth i]MRP-L51e6i9ri1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
RA [auth j]EUF08791e6i9rj1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
SA [auth k]MRP_L53e6i9rk1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
UA [auth m]Mitoc_L55e6i9rm1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Mitoc_L55ECOD (1.6)
VA [auth o]MRP-63e6i9ro1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
WA [auth p]RF-1_Ne6i9rp1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
E [auth 4]Ribosomal_L36e6i9r41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
XA [auth q]CR6_interacte6i9rq1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: CR6_interactECOD (1.6)
YA [auth r]Ribosomal_S18e6i9rr1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
ZA [auth s]PDCD9e6i9rs1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
F [auth 5]PDCD9e6i9r51 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
G [auth 6]PBPe6i9r61 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)
H [auth 7]TGSe6i9r72 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
H [auth 7]tRNA_SADe6i9r71 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
I [auth 8]MRP-L28e6i9r81 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
M [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
M [auth D]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
M [auth D]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
N [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
N [auth E]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
O [auth F]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
O [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
P [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
P [auth H]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
Q [auth I]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
Q [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
R [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
R [auth J]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
R [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
S [auth K]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
S [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
T [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
T [auth L]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
U [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
V [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
W [auth O]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
W [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
X [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
Y [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Z [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Z [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AA [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BA [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CA [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
C [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DA [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
DA [auth V]PF00467KOW motif (KOW)KOW motif- Family
FA [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
GA [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
HA [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
D [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
E [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
F [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
G [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]39S ribosomal protein L32, mitochondrial
J [auth 9]39S ribosomal protein L41, mitochondrial
K [auth A]16S rRNA---
L [auth B]tRNA Val---
M [auth D]39S ribosomal protein L2, mitochondrial
N [auth E]39S ribosomal protein L3, mitochondrial
O [auth F]39S ribosomal protein L4, mitochondrial
P [auth H]39S ribosomal protein L9, mitochondrial
Q [auth I]39S ribosomal protein L10, mitochondrial
R [auth J]39S ribosomal protein L11, mitochondrial
S [auth K]39S ribosomal protein L13, mitochondrial
B [auth 1]39S ribosomal protein L33, mitochondrial
T [auth L]39S ribosomal protein L14, mitochondrial
U [auth M]39S ribosomal protein L15, mitochondrial
V [auth N]39S ribosomal protein L16, mitochondrial
W [auth O]39S ribosomal protein L17, mitochondrial
X [auth P]Mitochondrial ribosomal protein L18, isoform CRA_b
Y [auth Q]39S ribosomal protein L19, mitochondrial
Z [auth R]39S ribosomal protein L20, mitochondrial
AA [auth S]39S ribosomal protein L21, mitochondrial
BA [auth T]39S ribosomal protein L22, mitochondrial
CA [auth U]39S ribosomal protein L23, mitochondrial
C [auth 2]39S ribosomal protein L34, mitochondrial
DA [auth V]39S ribosomal protein L24, mitochondrial
EA [auth W]39S ribosomal protein L27, mitochondrial
FA [auth X]39S ribosomal protein L28, mitochondrial
GA [auth Y]39S ribosomal protein L47, mitochondrial
HA [auth Z]39S ribosomal protein L30, mitochondrial
IA [auth a]39S ribosomal protein L42, mitochondrial
JA [auth b]39S ribosomal protein L43, mitochondrial
KA [auth c]39S ribosomal protein L44, mitochondrial
LA [auth d]39S ribosomal protein L45, mitochondrial
MA [auth e]39S ribosomal protein L46, mitochondrial
D [auth 3]39S ribosomal protein L35, mitochondrial
NA [auth f]39S ribosomal protein L48, mitochondrial-
OA [auth g]39S ribosomal protein L49, mitochondrial
PA [auth h]39S ribosomal protein L50, mitochondrial-
QA [auth i]39S ribosomal protein L51, mitochondrial
RA [auth j]cDNA FLJ76418, highly similar to Homo sapiens mitochondrial ribosomal protein L52 (MRPL52), transcript variant 1, mRNA
SA [auth k]39S ribosomal protein L53, mitochondrial-
TA [auth l]39S ribosomal protein L54, mitochondrial
UA [auth m]39S ribosomal protein L55, mitochondrial
VA [auth o]Ribosomal protein 63, mitochondrial
WA [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
E [auth 4]39S ribosomal protein L36, mitochondrial
XA [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
YA [auth r]39S ribosomal protein S18a, mitochondrial
ZA [auth s]39S ribosomal protein S30, mitochondrial
AB [auth C]Quinupristin---
F [auth 5]39S ribosomal protein L37, mitochondrial
G [auth 6]39S ribosomal protein L38, mitochondrial-
H [auth 7]39S ribosomal protein L39, mitochondrial
I [auth 8]39S ribosomal protein L40, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR002677Large ribosomal subunit protein bL32Family
A [auth 0]IPR051991Mitochondrial ribosomal protein bL32Family
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
J [auth 9]IPR019189Large ribosomal subunit protein mL41Family
M [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
M [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
M [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
M [auth D]IPR002171Large ribosomal subunit protein uL2Family
N [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
N [auth E]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
N [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
N [auth E]IPR000597Large ribosomal subunit protein uL3Family
O [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
O [auth F]IPR002136Large ribosomal subunit protein uL4Family
O [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
P [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
P [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
P [auth H]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
P [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
P [auth H]IPR000244Large ribosomal subunit protein bL9Family
Q [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
Q [auth I]IPR001790Large ribosomal subunit protein uL10Family
Q [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
R [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
R [auth J]IPR000911Ribosomal protein uL11Family
R [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
R [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
R [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
R [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
S [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
S [auth K]IPR005822Large ribosomal subunit protein uL13Family
S [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
S [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
B [auth 1]IPR052008Mitochondrial ribosomal protein bL33Family
B [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
B [auth 1]IPR001705Large ribosomal subunit protein bL33Family
T [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
T [auth L]IPR000218Large ribosomal subunit protein uL14Family
U [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
U [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
U [auth M]IPR030878Large ribosomal subunit protein uL15Family
U [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
V [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
V [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
V [auth N]IPR047873Large ribosomal subunit protein uL16Family
W [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
W [auth O]IPR000456Large ribosomal subunit protein bL17Family
X [auth P]IPR005484Large ribosomal subunit protein uL18Family
X [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Y [auth Q]IPR001857Large ribosomal subunit protein bL19Family
Y [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Y [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Z [auth R]IPR005813Large ribosomal subunit protein bL20Family
AA [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
AA [auth S]IPR001787Large ribosomal subunit protein bL21Family
AA [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
BA [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
BA [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BA [auth T]IPR001063Large ribosomal subunit protein uL22Family
CA [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
CA [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
C [auth 2]IPR000271Large ribosomal subunit protein bL34Family
DA [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth V]IPR003256Large ribosomal subunit protein uL24Family
DA [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
DA [auth V]IPR005824KOWDomain
DA [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EA [auth W]IPR001684Large ribosomal subunit protein bL27Family
FA [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
FA [auth X]IPR026569Large ribosomal subunit protein bL28Family
FA [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
GA [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
GA [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
HA [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
HA [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
HA [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IA [auth a]IPR019346Large ribosomal subunit protein mL42Family
JA [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth b]IPR039927Large ribosomal subunit protein mL43Family
KA [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
KA [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
KA [auth c]IPR014720Double-stranded RNA-binding domainDomain
LA [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
LA [auth d]IPR007379Tim44-like domainDomain
LA [auth d]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
MA [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
MA [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
MA [auth e]IPR040008Large ribosomal subunit protein mL46Family
MA [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
D [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
D [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
D [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
NA [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth f]IPR027487Large ribosomal subunit protein mL48Family
NA [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth g]IPR007740Large ribosomal subunit protein mL49Family
PA [auth h]IPR018305Large ribosomal subunit protein mL50Family
QA [auth i]IPR019373Large ribosomal subunit protein mL51Family
RA [auth j]IPR034596Large ribosomal subunit protein mL52Family
SA [auth k]IPR019716Large ribosomal subunit protein mL53Family
SA [auth k]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
TA [auth l]IPR013870Large ribosomal subunit protein mL54Family
UA [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
UA [auth m]IPR018615Large ribosomal subunit protein mL55Family
VA [auth o]IPR016576Large ribosomal subunit protein mL63Family
WA [auth p]IPR052104Mitochondrial Release Factor mL62Family
WA [auth p]IPR000352Peptide chain release factor class IDomain
E [auth 4]IPR000473Large ribosomal subunit protein bL36Family
E [auth 4]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
E [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
XA [auth q]IPR018472Large ribosomal subunit protein mL64Family
XA [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
YA [auth r]IPR001648Small ribosomal subunit protein bS18Family
YA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
ZA [auth s]IPR039982Large ribosomal subunit protein mL65Family
ZA [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
F [auth 5]IPR052482Mitochondrial large ribosomal subunit mL37Family
F [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
G [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
G [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
G [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
H [auth 7]IPR012676TGS-likeHomologous Superfamily
H [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
H [auth 7]IPR050062Proline-tRNA synthetaseFamily
H [auth 7]IPR004095TGSDomain
H [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
I [auth 8]IPR019192Large ribosomal subunit protein mL40Family
I [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 0]PharosQ9BYC8
J [auth 9]PharosQ8IXM3
M [auth D]PharosQ5T653
N [auth E]PharosP09001
O [auth F]PharosQ9BYD3
P [auth H]PharosQ9BYD2
Q [auth I]PharosQ7Z7H8
R [auth J]PharosQ9Y3B7
S [auth K]PharosQ9BYD1
B [auth 1]PharosO75394
T [auth L]PharosQ6P1L8
U [auth M]PharosQ9P015
V [auth N]PharosQ9NX20
W [auth O]PharosQ9NRX2
Y [auth Q]PharosP49406
Z [auth R]PharosQ9BYC9
CA [auth U]PharosQ16540
C [auth 2]PharosQ9BQ48
DA [auth V]PharosQ96A35
EA [auth W]PharosQ9P0M9
FA [auth X]PharosQ13084
GA [auth Y]PharosQ9HD33
HA [auth Z]PharosQ8TCC3
IA [auth a]PharosQ9Y6G3
JA [auth b]PharosQ8N983
KA [auth c]PharosQ9H9J2
LA [auth d]PharosQ9BRJ2
D [auth 3]PharosQ9NZE8
NA [auth f]PharosQ96GC5
OA [auth g]PharosQ13405
PA [auth h]PharosQ8N5N7
QA [auth i]PharosQ4U2R6
TA [auth l]PharosQ6P161
UA [auth m]PharosQ7Z7F7
VA [auth o]PharosQ9BQC6
WA [auth p]PharosQ14197
E [auth 4]PharosQ9P0J6
XA [auth q]PharosQ8TAE8
YA [auth r]PharosQ9NVS2
ZA [auth s]PharosQ9NP92
F [auth 5]PharosQ9BZE1
H [auth 7]PharosQ9NYK5
I [auth 8]PharosQ9NQ50

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
K [auth A]2MA Parent Component: A

K [auth A]2MU Parent Component: U

K [auth A]5MC Parent Component: C

K [auth A]5MU Parent Component: U

AB [auth C]004
AB [auth C]DBB RESIDAA0112

PSI-MOD :  (2S,3S,2'R)-3-methyllanthionine MOD:00121
AB [auth C]MHT RESIDAA0112

AB [auth C]MHU Parent Component: PHE

RESIDAA0112

AB [auth C]MHV RESIDAA0112

AB [auth C]MHW RESIDAA0112