6HLU
Crystal structure of the LRR-Roc-COR domain of the Chlorobium tepidum Roco protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ras-like P-loop GTPases | 8053531 | 3002022 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053520 | 3000034 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053521 | 3000034 | SCOP2B (2021-05-27) |
A | SCOP2B Superfamily | COR C-terminal lobe-like | 8053527 | 3002202 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053520 | 3000034 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | COR C-terminal lobe-like | 8053527 | 3002202 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Ras-like P-loop GTPases | 8053531 | 3002022 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12799 | e6hluA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF12799 | ECOD (1.6) |
A | PF16095 | e6hluA5 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF16095 | ECOD (1.6) |
A | F_UNCLASSIFIED | e6hluA2 | A: a+b two layers | X: TBP-like | H: C-terminal TBP-like domain of Roc (From Topology) | T: C-terminal TBP-like domain of Roc | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF08477 | e6hluA4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF08477 | ECOD (1.6) |
B | PF12799 | e6hluB2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF12799 | ECOD (1.6) |
B | PF16095 | e6hluB3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF16095 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6hluB4 | A: a+b two layers | X: TBP-like | H: C-terminal TBP-like domain of Roc (From Topology) | T: C-terminal TBP-like domain of Roc | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF08477 | e6hluB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF08477 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16095 | C-terminal of Roc, COR, domain (COR) | C-terminal of Roc, COR, domain | - | Family | |
PF08477 | Ras of Complex, Roc, domain of DAPkinase (Roc) | Ras of Complex, Roc, domain of DAPkinase | Roc, or Ras of Complex, proteins are mitochondrial Rho proteins (Miro-1, Swiss:Q8IXI2, and Miro-2, Swiss:Q8IXI1) and atypical Rho GTPases. Full-length proteins have a unique domain organisation, with tandem GTP-binding domains and two EF hand domains ... | Domain | |
PF12799 | Leucine Rich repeats (2 copies) (LRR_4) | Leucine Rich repeats (2 copies) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR025875 | Leucine rich repeat 4 | Repeat | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR020859 | Roc domain | Domain | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR005225 | Small GTP-binding protein domain | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR003591 | Leucine-rich repeat, typical subtype | Repeat | |
IPR032171 | C-terminal of Roc (COR) domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |