Skip to main content

 5YH1 | pdb_00005yh1

Member of s1p family of ribosomal proteins PF0399 DHH domain

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae5yh1A1 A: alpha arraysX: PriB N-terminal domain-likeH: Ubiquitin-relatedT: Ubiquitin-likeF:ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.90.1640.30 Alpha Beta Alpha-Beta Complex inorganic pyrophosphatase (n-terminal core) CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01368DHH family, N-terminal domain (DHH)DHH family, N-terminal domainIt is predicted that this family of proteins all perform a phosphoesterase function. This domain is found at the N-terminal of the single stranded DNA exonuclease RecJ. It shows an alpha-beta configuration [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Member of s1p family of ribosomal proteins - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001667DHH domainDomain
IPR001305Heat shock protein DnaJ, cysteine-rich domainDomain
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typeDomain
IPR003029S1 domainDomain
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR038763DHH phosphoesterase superfamilyHomologous Superfamily
IPR051673Single-stranded-DNA-specific exonuclease RecJFamily
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilyHomologous Superfamily