5TVQ
Mouse Tdp2 catalytic domain bound to SUMO2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5tvqb_ | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Ubiquitin-like | Ubiquitin-related | SUMO-2 | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Exo_endo_phos | e5tvqA1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: Exo_endo_phos | ECOD (1.6) |
B | Rad60-SLD | e5tvqB1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Rad60-SLD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03372 | Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) | Endonuclease/Exonuclease/phosphatase family | This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling [1]. This family includes: AP endonuclease proteins EC:4.2.99.18 e.g Swiss:P27695, DNase I proteins EC:3. ... | Domain | |
PF11976 | Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) | Ubiquitin-2 like Rad60 SUMO-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005135 | Endonuclease/exonuclease/phosphatase | Domain | |
IPR051547 | Tyrosyl-DNA phosphodiesterase 2-like | Family | |
IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | Homologous Superfamily | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR022617 | Rad60/SUMO-like domain | Domain |