Crystal structure of the metallo-beta-lactamase GOB-18 from Elizabethkingia meningoseptica
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d5k0wa_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | automated matches | automated matches | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
| B | d5k0wb_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | automated matches | automated matches | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8087077 | 3001057 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Zn metallo-beta-lactamase | 8087076 | 4002289 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Metallo-hydrolase/oxidoreductase | 8087077 | 3001057 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Asp | e5k0wA1 | A: beta barrels | X: Rossmann-like | H: RIFT-related | T: acid protease | F: Asp | ECOD (v294.2) |
| B | Glyco_hydro_18 | e5k0wB1 | A: beta barrels | X: omega toxin-like | H: omega toxin-related | T: omega toxin-related | F: Glyco_hydro_18 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
| B | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3004213 | GOB-18 | GOB-18 is a member of subclass B3 GOB family of beta-lactamases isolated from Elizabethkingia meningoseptica. GOB-18 is unlike other subclass B3 beta-lactamases as it is fully active against a broad range of beta-lactam substrates using a single Zn(II) ion in its active site. | CARD (4.0.1) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:3004212 | GOB beta-lactamase | carbapenem, cephalosporin, penicillin beta-lactam | antibiotic inactivation | CARD (4.0.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Class B carbapenemase GOB-18 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily | |
| IPR001279 | Metallo-beta-lactamase | Domain | |
| IPR051453 | Metallo-Beta-Lactamase Glyoxalase II | Family |














