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 5G13 | pdb_00005g13

Pseudomonas aeruginosa HDAH (H143A) unliganded.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyArginase/deacetylase-like 8100520 3000260 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyArginase/deacetylase-like 8100520 3000260 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BLectin_Ce5g13B1 A: alpha arraysX: Long alpha-hairpinH: Ribosomal protein L29 (L29p)T: Ribosomal protein L29 (L29p)F: Lectin_CECOD (v295.2)
ALectin_Ce5g13A1 A: alpha arraysX: Long alpha-hairpinH: Ribosomal protein L29 (L29p)T: Ribosomal protein L29 (L29p)F: Lectin_CECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.800.20 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (4.3.0)
A3.40.800.20 Alpha Beta 3-Layer(aba) Sandwich Arginase Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00850Histone deacetylase domain (Hist_deacetyl)Histone deacetylase domainHistones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases are related to other proteins [1]. ...Histones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases are related to other proteins [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
HDAH - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000286Histone deacetylase HDACFamily
A, B
IPR023696Ureohydrolase domain superfamilyHomologous Superfamily
A, B
IPR023801Histone deacetylase domainDomain
A, B
IPR037138Histone deacetylase domain superfamilyHomologous Superfamily