5AAM
Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2 Family | Class II viral fusion proteins C-terminal domain | 8073053 | 4007569 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | E set domains | 8073054 | 3000070 | SCOP2 (2022-06-29) |
D [auth J] | SCOP2B Superfamily | E set domains | 8073054 | 3000070 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | V-set | e5aamA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
A | V-set_10 | e5aamA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_10 | ECOD (1.6) |
B | V-set_8 | e5aamB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B | V-set | e5aamB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
C | Flavi_glycop_C | e5aamC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
D [auth J] | Flavi_glycop_C | e5aamJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C | 2.60.40.350 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D [auth J] | 2.60.40.350 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
SCFV513, anti-dengue virus | SCFV-HEAVY-KAPPA | Chimeric (chimeric) | IGHV1-18*01, IGHV1-18*04, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGKV3-5*01, IGKJ1*01 | V-DOMAIN VH, V-DOMAIN V-KAPPA | IG | SCFV-HEAVY-KAPPA | IMGT (202440-0) |