5A6C
Concomitant binding of Afadin to LGN and F-actin directs planar spindle orientation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13424 | e5a6cA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF13424 | ECOD (1.6) |
B | PF13424 | e5a6cB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF13424 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
B | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13181 | Tetratricopeptide repeat (TPR_8) | Tetratricopeptide repeat | - | Repeat | |
PF13176 | Tetratricopeptide repeat (TPR_7) | Tetratricopeptide repeat | - | Repeat | |
PF13374 | Tetratricopeptide repeat (TPR_10) | Tetratricopeptide repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002710 | Dilute domain | Domain | |
IPR028842 | Afadin | Family | |
IPR000159 | Ras-associating domain | Domain | |
IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily | |
IPR000253 | Forkhead-associated (FHA) domain | Domain | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR037977 | Afadin, cargo binding domain | Domain | |
IPR001478 | PDZ domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR003109 | GoLoco motif | Conserved Site | |
IPR019734 | Tetratricopeptide repeat | Repeat |