Crystal structure of truncated FlgD (monoclinic form) from the human pathogen Helicobacter pylori
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Csx12 | e4zzkD1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: Csx12 | ECOD (v294.1) |
| C | Csx12 | e4zzkC1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: Csx12 | ECOD (v294.1) |
| B | Csx12 | e4zzkB1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: Csx12 | ECOD (v294.1) |
| A | Csx12 | e4zzkA1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: Csx12 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.60.40.4070 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| C | 2.60.40.4070 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| B | 2.60.40.4070 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| A | 2.60.40.4070 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13860 | FlgD Ig-like domain (FlgD_ig) | FlgD Ig-like domain | This domain has an immunoglobulin like beta sandwich fold. It is found in the FlgD protein the flagellar hook capping protein. The structure for this domain shows that it is inserted within a TUDOR like beta barrel domain [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Basal-body rod modification protein FlgD | - |
