Annotations: 4IHW

Crystal structure of Fis bound to 27 bp Inosine substituted DNA F28-dI (AAATTTGTTTGAICITTGAGCAAATTT)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d4ihwb_	All alpha proteins	DNA/RNA-binding 3-helical bundle	Homeodomain-like	FIS-like	FIS protein	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
A	d4ihwa_	All alpha proteins	DNA/RNA-binding 3-helical bundle	Homeodomain-like	FIS-like	FIS protein	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	HSP70	e4ihwB1	A: alpha arrays	X: Major vault protein (MVP) structural repeat domain	H: Major vault protein (MVP) structural repeat domain	T: Major vault protein (MVP) structural repeat domain	F: HSP70	ECOD (v295.2)
A	V-set	e4ihwA2	A: alpha arrays	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: V-set	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.10.60	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Homeodomain-like	CATH (4.3.0)
A	1.10.10.60	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Homeodomain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02954	Bacterial regulatory protein, Fis family (HTH_8)	Bacterial regulatory protein, Fis family		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D	27-bp DNA Strand B	-	-	-
C	27-bp DNA Strand A	-	-	-
A, B	DNA-binding protein fis	DNA binding binding nucleic acid binding identical protein binding protein binding protein homodimerization activity protein dimerization activity sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding transcription regulatory region nucleic acid binding DNA binding, bending sequence-specific DNA binding, bending DNA binding binding nucleic acid binding identical protein binding protein binding protein homodimerization activity protein dimerization activity sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding transcription regulatory region nucleic acid binding DNA binding, bending sequence-specific DNA binding, bending core promoter sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity DNA-binding transcription repressor activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process regulation of DNA recombination positive regulation of biological process positive regulation of metabolic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of DNA recombination DNA recombination DNA metabolic process positive regulation of DNA metabolic process regulation of DNA metabolic process cellular component organization organelle organization chromosome organization cellular component organization or biogenesis response to stimulus response to radiation response to abiotic stimulus provirus excision latent virus replication viral latency viral process release from viral latency	protein-containing complex catalytic complex invertasome intracellular protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle protein-containing complex catalytic complex invertasome intracellular protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle organelle membraneless organelle nucleoid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR009057	Homeodomain-like superfamily	Homologous Superfamily
A, B	IPR002197	DNA binding HTH domain, Fis-type	Domain
A, B	IPR005412	DNA-binding protein Fis	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.