Crystal structure of VapBC2 from Rickettsia felis bound to a DNA fragment from their promoter


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EPeptidase_C14e3zvkE1 A: beta barrelsX: Baculovirus p35 protein-relatedH: RIFT-relatedT: Phage tail proteinsF: Peptidase_C14ECOD (v294.2)
FPeptidase_M14e3zvkF1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Peptidase_M14ECOD (v294.2)
GPeptidase_M14e3zvkG1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Peptidase_M14ECOD (v294.2)
HPeptidase_M14e3zvkH1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Peptidase_M14ECOD (v294.2)
AThioredoxine3zvkA1 A: beta barrelsX: Baculovirus p35 protein-relatedH: RIFT-relatedT: Phage tail proteinsF: ThioredoxinECOD (v294.2)
BPeptidase_M14e3zvkB1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Peptidase_M14ECOD (v294.2)
CPeptidase_M14e3zvkC1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Peptidase_M14ECOD (v294.2)
DPeptidase_M14e3zvkD1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Peptidase_M14ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.1010 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold 5'-nucleaseCATH (4.3.0)
B3.40.50.1010 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold 5'-nucleaseCATH (4.3.0)
C3.40.50.1010 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold 5'-nucleaseCATH (4.3.0)
D3.40.50.1010 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold 5'-nucleaseCATH (4.3.0)