3WWJ | pdb_00003wwj

Crystal structure of an engineered sitagliptin-producing transaminase, ATA-117-Rd11

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Peptidase_M24	e3wwjL1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
K	Peptidase_M24	e3wwjK1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
J	Peptidase_M24	e3wwjJ1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
I	Peptidase_M24	e3wwjI1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
H	Peptidase_M24	e3wwjH1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
G	Peptidase_M24	e3wwjG1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
F	Peptidase_M24	e3wwjF1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
E	Peptidase_M24	e3wwjE1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
D	Peptidase_M24	e3wwjD1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
C	Peptidase_M24	e3wwjC1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
B	Peptidase_M24	e3wwjB1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)
A	Peptidase_M24	e3wwjA1	A: alpha arrays	X: Chlorophyll a-b binding protein	H: Chlorophyll a-b binding protein	T: Chlorophyll a-b binding protein	F: Peptidase_M24	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
L	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
K	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
K	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
J	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
J	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
I	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
I	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
H	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
H	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
G	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
G	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
F	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
F	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
E	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
E	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
D	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
D	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
C	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
C	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
B	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
B	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)
A	3.30.470.10	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
A	3.20.10.10	Alpha Beta	Alpha-Beta Barrel	D-amino Acid Aminotransferase	Chain A, domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	(R)-amine transaminase	catalytic activity	biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process small molecule metabolic process metabolic process cellular process carboxylic acid biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR050571	Class-IV Pyridoxal-Phosphate-Dependent Aminotransferase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR043132	Branched-chain-amino-acid aminotransferase-like, C-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR043131	Branched-chain-amino-acid aminotransferase-like, N-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR001544	Aminotransferase class IV	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036038	Aminotransferase-like, PLP-dependent enzymes	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	CSO	Parent Component: CYS : AA0205 : L-cysteine sulfenic acid MOD:00210

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.