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 3KHN | pdb_00003khn

Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyOmpA-like 8083925 3001650 SCOP2B (2022-06-29)
ASCOP2 FamilyOmpA-like 8080602 4001470 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyOmpA-like 8083925 3001650 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Badh_shorte3khnB1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: adh_shortECOD (v295.2)
AOmpAe3khnA1 A: alpha arraysX: Cystatin-likeH: NTF2-likeT: NTF2-likeF: OmpAECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.1330.60 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
A3.30.1330.60 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00691OmpA family (OmpA)OmpA family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
MotB protein, putative- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006665OmpA-like domainDomain
A, B
IPR025713Motility protein B-like, N-terminal domainDomain
A, B
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
A, B
IPR036737OmpA-like domain superfamilyHomologous Superfamily