Crystal structure of the effector binding domain of a CATM variant (R156H)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Semialdhyde_dhC | e3glbD1 | A: alpha arrays | X: Lipocalins/Streptavidin | H: Enterocin 7A and 7B | T: Enterocin 7A and 7B | F: Semialdhyde_dhC | ECOD (v295.2) |
| C | LysR_substrate | e3glbC1 | A: alpha arrays | X: Alpha-lytic protease prodomain-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v295.2) |
| B | LysR_substrate | e3glbB1 | A: alpha arrays | X: Alpha-lytic protease prodomain-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v295.2) |
| A | LysR_substrate | e3glbA1 | A: alpha arrays | X: Alpha-lytic protease prodomain-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| C | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| HTH-type transcriptional regulator catM | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR054949 | HTH-type transcriptional regulator CatM | Family | |
| IPR005119 | LysR, substrate-binding | Domain | |
| IPR000847 | LysR, HTH, N-terminal domain | Domain | |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
| IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |