Skip to main content

 3EDD | pdb_00003edd

Structural base for cyclodextrin hydrolysis

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3eddb1 All beta proteins Immunoglobulin-like beta-sandwich E set domains automated matches automated matches (Flavobacterium sp. 92 ) [TaxId: 197856 ], SCOPe (2.08)
Bd3eddb3 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain automated matches automated matches (Flavobacterium sp. 92 ) [TaxId: 197856 ], SCOPe (2.08)
Bd3eddb2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Cyclomaltodextrinase, central domain (Flavobacterium sp. 92 ) [TaxId: 197856 ], SCOPe (2.08)
Ad3edda1 All beta proteins Immunoglobulin-like beta-sandwich E set domains automated matches automated matches (Flavobacterium sp. 92 ) [TaxId: 197856 ], SCOPe (2.08)
Ad3edda3 All beta proteins Glycosyl hydrolase domain Glycosyl hydrolase domain automated matches automated matches (Flavobacterium sp. 92 ) [TaxId: 197856 ], SCOPe (2.08)
Ad3edda2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Cyclomaltodextrinase, central domain (Flavobacterium sp. 92 ) [TaxId: 197856 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamily(Trans)glycosidases 8035829 3000313 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8035825 3001528 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyE set domains 8054931 3000070 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyE set domains 8054931 3000070 SCOP2B (2022-06-29)
ASCOP2B Superfamily(Trans)glycosidases 8035829 3000313 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGlycosyl hydrolase domain-like 8035825 3001528 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be3eddB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF:ECOD (v295.2)
ATUDORe3eddA1 A: alpha arraysX: UBC-likeH: UBC-likeT: UBC-likeF: TUDORECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Cyclomaltodextrinase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR015171Cyclomaltodextrinase, N-terminalDomain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR014756Immunoglobulin E-setHomologous Superfamily
A, B
IPR006047Glycosyl hydrolase family 13, catalytic domainDomain
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR019492Cyclo-malto-dextrinase, C-terminalDomain
A, B
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily